Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00432 ATGGCATCGCATTTACTCAATCACTCCGCTAAGATGAGAAATGCTTCGAAGTTGCTGCACCACGAGCACGCTCTCTTGGTTCGTTGGTTTTCCGGCCATGCTCAATCGTCTCTCAATAGGAACCGCGATGTGTGGAAAACTCAGCTTCCTGAGTCTTCAACAAGAAGCAGTTTCTTTGAACCGGCCTCCGGCTTTACTAAACGTTCATTTGGTACGCAGAAGAGAAACATCTCCATGGCTAGCATTAAAAGGGGTTCCATTATCGGGTCTGGGTTCAATGGAGAGATTTCACATTCACAGGTGTTGTCAAGGAGATGCTATGCGTCAGCCTCAGATTTACCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGACAGAGGGTAACATTGCGAGATGGTTGAAGAAAGAAGGTGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACTGTTGAAATGGAAAGTATGGAAGAAGGTTATCTGGCCAAGATAGTCCGTGGAGATGGGGAAAAAGAAATTAAAGTTGGTGAGGTAATCGCCATAACTGTTGAAGATGAGGGGGATATTGTCAAGTTTAACGATTACAAACCTTCAGCATCTGAATCAAGTGCACCTCCTGCTAAAGAAACATCTGCCCCATCCCCACCAAAGAAGGAGGTGGCAGAGGAGCCTGCTCGAGAATTTGAGCCAAAGGTTTCCAAACCTAGTGCGCCAACTTCATCTGGAGATCGCATATTTGCTAGTCCTCTTGCTAGAAAGTTGGCTGAAGAGAAAAATGTACCTCTCTCTAGCATTAAAGGAACAGGACATGAAGGACTCATTGTGAAGGCTGATATTGAAGATTTCTTGGCTTCTGGTGAAGTTTCCGCACCCTCAAAGGCCAAGGGTGCAACAGATGCAGCTTTGGATTATACCGACATTCCAGTCTCTCAGATACGGAAGGTCACAGCTTCACGTCTATTATTATCAAAGCAAACTATTCCTCATTACTATTTAACAGTGGATGCATGTGTTGACAAACTCATGAGTTTACGGAGCAAACTCAATTCATTGCAAGAAGCCTCTGGTGGCTCCCGCATATCGGTTAATGACCTTGTAATCAAGGCTGCTGCATTGGCTCTCCGCAAAGTTCCTCAGTGTAACAGTTCATGGGCAACTGATTATATTCGCCAGTATAATAATGTGAATATTAATGTAGCTGTGCAGACTGATAATGGGCTCTTTGTTCCAGTCATCAGGGATGCAGACAAGAAAGGACTCTCTACAATAGGAGAGGAGGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCAAACCTGGGAGGGCCATTTGGTGTCAAACAATTCTGTGCAATCATCAATCCTCCTCAGTCGGGCATTCTTGCAGTTGGATCTGCTGAGAGGCGGGTCATTCCGGGATCAGGTGCTGAAGAATTCAAGTTTGCTTCTTTCATGTCCGTGACCCTCAGTTGTGATCATCGTGTTATAGATGGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCCAGAATCCATGTTGTTGTAA 1632 0.4442 MASHLLNHSAKMRNASKLLHHEHALLVRWFSGHAQSSLNRNRDVWKTQLPESSTRSSFFEPASGFTKRSFGTQKRNISMASIKRGSIIGSGFNGEISHSQVLSRRCYASASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMESMEEGYLAKIVRGDGEKEIKVGEVIAITVEDEGDIVKFNDYKPSASESSAPPAKETSAPSPPKKEVAEEPAREFEPKVSKPSAPTSSGDRIFASPLARKLAEEKNVPLSSIKGTGHEGLIVKADIEDFLASGEVSAPSKAKGATDAALDYTDIPVSQIRKVTASRLLLSKQTIPHYYLTVDACVDKLMSLRSKLNSLQEASGGSRISVNDLVIKAAALALRKVPQCNSSWATDYIRQYNNVNINVAVQTDNGLFVPVIRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQSGILAVGSAERRVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00432 543 MobiDBLite consensus disorder prediction 224 239 - -
Lapu10g00432 543 CDD lipoyl_domain 117 190 - -
Lapu10g00432 543 Coils Coil 343 363 - -
Lapu10g00432 543 Gene3D - 111 217 - -
Lapu10g00432 543 Gene3D - 243 296 IPR036625 GO:0016746
Lapu10g00432 543 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 298 541 - -
Lapu10g00432 543 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 141 170 IPR003016 -
Lapu10g00432 543 Pfam Biotin-requiring enzyme 118 190 IPR000089 -
Lapu10g00432 543 Pfam e3 binding domain 254 289 IPR004167 GO:0016746
Lapu10g00432 543 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 70 543 IPR045257 GO:0006086|GO:0045254
Lapu10g00432 543 Gene3D - 297 541 IPR023213 -
Lapu10g00432 543 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 118 543 IPR006257 GO:0004742|GO:0006090|GO:0045254
Lapu10g00432 543 MobiDBLite consensus disorder prediction 203 253 - -
Lapu10g00432 543 SUPERFAMILY Single hybrid motif 115 210 IPR011053 -
Lapu10g00432 543 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 312 543 IPR001078 GO:0016746
Lapu10g00432 543 SUPERFAMILY CoA-dependent acyltransferases 312 543 - -
Lapu10g00432 543 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 112 216 - -
Lapu10g00432 543 ProSiteProfiles Biotinyl/lipoyl domain profile. 116 192 IPR000089 -
Lapu10g00432 543 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 255 292 IPR004167 GO:0016746
Lapu10g00432 543 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 247 293 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00432 Lapu-Chr10 6714878 6720776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00432 2 543 Acyl Lipid Metabolism Gene Families AT1G54220 66.850 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00432 K00627 - gmx:100804938 943.725