Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00420 ATGAATTTGGAACAAATTGTGCAGCCTAAACCATCTAATGGATACAGTCGTCGGAAATCTGAGAAAGAAGGGGGAACTAAGTCTGATTATAAGATCCCCTCCGGAAAGTCAAATGCCAGCAGCAGATTAGCAAGTACAGGTGTAGTGACTGGCAATAAAGGCGGTAGTTATGTGAGTCCTTCACATGATCGACTAGTATATCTAACAACATGCCTTATTGGGCAGCATGTGGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAGTATTTCATGCAACAAATACTGACAAAGATTATGGAATCATTTTGAAAATGGCTTGTTTGACCAAGGATGGCTCCTTGCAAGGACAGAGATTTGGAGTAGAATCTATCAGCAAACCTCCTTCTAAGACTTTAATTATACCTTCCAATGACCTTGTACAAGTTATAGCGAAGGATGTTTCTGTTTTCAGAGATGGCCAAACTAGTGAACCTCACTATGACGTGCATCATGAGATCATGGTTGATTCAGTAATATCTCAATCTCGTCAAGTAGAGACAGGCAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCCAGAATGCCCTGAACTGGAAAATATCTTCGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAACAAAATGTTATTTGGTGTAAAAAGCACATTCAATGAGGAGTTATATACAACAAAGCTTGAAAAAGGGCCCCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATTGCTAGAGAAATTGAGGGTGAGGAAACCCAAGATCTCCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAGACCAGATTCTCTTCAGTCTATAGGGGTAAAGTTGTTGATGATATTGGATATGACGAAAATGAGGATGAGTTGTTGGATAATATTTATGTCATTAAGAGACCAGGTGAAGTAAGTGGTCAGAAAGGCGATAATGGAACTCAAGCATGGTCAAATTTCTCCTCTGTGGATCACTCGGAGTTATCCCAGTCAAGTACTGGTATGGATTTATGTCGTTCTGGTTCTATTGATCATGCTAAGCAGTTAGCATGTGAACTCCCTGGCCAGAGTTGCTCATTTTCAGATGGTCAAAGCAGGATTCAGGAGAACTCAGCTAATAACCTACATGGAGCCAATGATAATACTGTGGAAGAAAATTGGATTCAAGCTGAGGATGCCCAACTGTCAAAATCTCAGGATTTACAGTCATTACTTGAGTCGAAGAAAGATGGTTCTGGGGAAGGGGGATTATCTCCCAATGGGGCCTCCTGTGCCCCTTCTACTCATAATTTGTTAAAGACTCCTGAAGAAATTGTGTCGGTTGGGGAAACAAAATCTATAATTTCACGTGGAAGACTAGGTAGTTGTACATCAACCTCTGGTCATGGTCTATCACCAAGTTCTTCGGTCGGTTCACTCTCTTCGGAAAAGTCAACTCTGAATCCCTATGCCAAGGAGTTCAAACTCAACCCTAATGCAAAGAGTTTTATGCCATCCCCATCACATGCTAGGCCACGCTCCCCAGTGTCTGATGGTTCCTTCTATTACCCTCCCACTGTATCTACCGTTCCTAACATGCCAGCCATGCCCATGGGTATTGGAGTTGGAACTACTTTTGCAGGGCCACAACCTGTCTTGTATAATCCACAAGTGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCGCAGTATGGACAACTTCTTGGTCATCCTAGGCAAGTTTTATATGTGCCAAGTTACCAACCTGAGATGCCGTACAAGGGACGGGATTATTAA 1827 0.422 MNLEQIVQPKPSNGYSRRKSEKEGGTKSDYKIPSGKSNASSRLASTGVVTGNKGGSYVSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGVFHATNTDKDYGIILKMACLTKDGSLQGQRFGVESISKPPSKTLIIPSNDLVQVIAKDVSVFRDGQTSEPHYDVHHEIMVDSVISQSRQVETGRELQRWVPDEDDPECPELENIFDGPWNRGWDQFETNKMLFGVKSTFNEELYTTKLEKGPQTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGKVVDDIGYDENEDELLDNIYVIKRPGEVSGQKGDNGTQAWSNFSSVDHSELSQSSTGMDLCRSGSIDHAKQLACELPGQSCSFSDGQSRIQENSANNLHGANDNTVEENWIQAEDAQLSKSQDLQSLLESKKDGSGEGGLSPNGASCAPSTHNLLKTPEEIVSVGETKSIISRGRLGSCTSTSGHGLSPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSPSHARPRSPVSDGSFYYPPTVSTVPNMPAMPMGIGVGTTFAGPQPVLYNPQVAQMPSQPYFHPNGPQYGQLLGHPRQVLYVPSYQPEMPYKGRDY* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00420 608 MobiDBLite consensus disorder prediction 31 46 - -
Lapu10g00420 608 PANTHER ATAXIN 2-RELATED 34 604 IPR045117 GO:0003723
Lapu10g00420 608 MobiDBLite consensus disorder prediction 15 29 - -
Lapu10g00420 608 Pfam Ataxin 2 SM domain 62 146 IPR025852 -
Lapu10g00420 608 MobiDBLite consensus disorder prediction 412 445 - -
Lapu10g00420 608 SMART LsmAD_2 222 291 IPR009604 -
Lapu10g00420 608 MobiDBLite consensus disorder prediction 1 46 - -
Lapu10g00420 608 MobiDBLite consensus disorder prediction 466 491 - -
Lapu10g00420 608 Pfam LsmAD domain 222 290 IPR009604 -
Lapu10g00420 608 Coils Coil 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00420 Lapu-Chr10 6581175 6593375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00420 - - gmx:100778053 971.074