Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00415 ATGGACAAGTGGGACAATAAACCATCAAGAAAACAGCACCCCAGAGAAAACCCTTCTTTCTCTTCCAGTCTCCTTGACGTTATCTACCGTTCAATCGAAGAAGATCAAACGGAGGAGAAGGAAGAGGAGCAACTCATCTTCTACAGAGAAACCATGAGGAAGCAGAAACAGAGCAATTGTTTCAGAGAGGACAAAACCGAAGCTGAGAAGCACAACTCTCGCAGAGCCAGGAAGGTGGAGAATTGGATGGAGAAGAGAACCTGCGAGAAAGTTCTAATGGGAAGAAACTCATTGACGGAATTTGAAAGAAGAATGCGAAACAATTCAATTTCAAACACTCTCTCCATGTATTCGAGCTCAACCTCTTCCTCTGAGTCAAGCTCTGTTGGGGGTTTCTCTTCTTCGGAGTCAGAGTCCTTCTATGGAGTGCAAAGGCCGAAGCCAATTAAAACCAGCGTTTCTGATAAAACCAAAACCAACTTCGATTCCGCACTTCACAATCACAACTTCAGGAGCCATTCCTCTCAAACCCAGAAGCCAAAGCATGAGAATGGTTTTGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCAATTTCACCAGGTGCAAGACTTGCCAGCTTTCTCAACTCTCTCTTCACTTCAAGTGGAAATGCCAAAAAACCAAAGGTTTCAACAACATCTACTTGTCGTCCTTCCCTGATTCCGGTTGCAACAAATCGTACTGCTGATACTAAATCAGCGGCACAAGAGCCTCCTGGTTCTACATGTTCATCAGCATCTTCTTTTTCAAGGTCGTGCTTGAGCAAAACCCCTTCTTCAAGATCAGGTGCCAAAAGGTCTGTGAGGTTTTGCCCTGTGAGTGTGATAGTGGATGAAGATTGTAGGCCTTGTGGGCACAAGAATGTTTATGAGGGTGAAGAAGGTCTGGTGGCTTCCAATGGAAAGAACAGGAGTGAGGAACTGAGGCTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAATTAGCAAGAGACTTGTTGAAAAATTATCAAAAAAAGAGTGAGGTGGAGTTTGATGCTGTTATGCATTATGAAGAAGAAGAAGAAGATGATGAGGATGTAGCCAGTTGTTCCAGTTCTGATCTCTTTGAGTTGGATAATCTATCAGCAATTGGGATTGAGAGGTATAGGGAAGAGTTACCTGTGTACGAAACTACCCATTTCAATACCAATAGAGCCATTGCCAATAGCTTCATTATGTAA 1272 0.4371 MDKWDNKPSRKQHPRENPSFSSSLLDVIYRSIEEDQTEEKEEEQLIFYRETMRKQKQSNCFREDKTEAEKHNSRRARKVENWMEKRTCEKVLMGRNSLTEFERRMRNNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPIKTSVSDKTKTNFDSALHNHNFRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSSGNAKKPKVSTTSTCRPSLIPVATNRTADTKSAAQEPPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNVYEGEEGLVASNGKNRSEELRLHVMQESRRVEELARDLLKNYQKKSEVEFDAVMHYEEEEEDDEDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFNTNRAIANSFIM* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00415 423 MobiDBLite consensus disorder prediction 114 187 - -
Lapu10g00415 423 MobiDBLite consensus disorder prediction 247 287 - -
Lapu10g00415 423 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 423 IPR039621 GO:0009734
Lapu10g00415 423 MobiDBLite consensus disorder prediction 57 77 - -
Lapu10g00415 423 MobiDBLite consensus disorder prediction 153 182 - -
Lapu10g00415 423 MobiDBLite consensus disorder prediction 114 141 - -
Lapu10g00415 423 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00415 Lapu-Chr10 6523627 6525423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00415 - - gmx:100798956 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02003 9 34880123 34881373 Lapu10g00415 10 6523627 6525423 ECH
Lapu10g00415 10 6523627 6525423 Lapu10g00415 10 6523627 6525423 ECH
Lapu10g00415 10 6523627 6525423 Lapu9g02003 9 34880123 34881373 ECH
Lapu10g00415 10 6523627 6525423 Lapu8g00726 8 25243224 25244652 ECH