Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00410 ATGGAAACTGTGGTTGGAATTGAGGATAATGATGATGGGAAGTTTGAAGACAGTGGTCTGGATAGAAGCAGTTCTGCTCTGTCTTCACCGAAGCAAATTTCTAACCCAATTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGAAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGGGGATTTTCTTGAGTATGAAAACAGTGAAATGCATGTTGTTGCTGACACTGGACAGAGTTTGGAATGCATATCGATTGAAAGATCATCTTCTGGGAAGCTACGATTGGAGTGCTCTGAAGGCTCAGCAGAGGCTGATTTGGGGAAACTAAATGCAAAATTACAGATTTTGCAAAAGGTCAAAGAAGAGGAGAAACAACGCATATCATGTGGATCACCTGTTCATTCTCATGTAAATATAGACAGCCAGTGTTCAGCTGATAAATGTCCTGTCATGGATGAGAAGGTTCAATCTGAAACTCCCTGCCAGGAAATTCCTTCTATAGCATCGAGTTTAAATTATACTCATAGCAATCAATCTGGGAGTATCGATCAGTGTTCTAGACCTTCAGAAGGAGTAATAGAAAGTGGATCATCTGCTTCTGCTGTCCATTCCAATTTGAAGCCTGACCTTTCAATGTCAGATGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTTCATGAACTGTTTAAGGTAACTTTTGGACGAGAAACTACTGTGAAAGACAAGCAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACCAACTCGTGTGATGTTTCAGCAACGACTTTCATTATTAAAGATAACAAAATAGTTAGAAAATTTGTAGAAGAAAGTTCTAGAAATATGAATGTTGCATCCTTAATTTCTTCGGAAAATATGACTGAAGAAGAGGACATCAACTTTAAGGATTCATCTGCTGTAAATGCTTGTGGAATTGATGATAACCAAGTTGTTTCTGAAATAAGACTGAGAAATCAAAATACAGAATATGGATTGGAAGATGAGAATAATCAGTCTGAACAAAGAGCTGCAAAAAGAATTCGAAGACCTACGAAGAGATATATTGAAGAGCTCTCGGAAAATGAATCTAGAGAGCAAAATCCTAGGTTGCCAATTTCTAATAAAAACACGGGACTAGGGCATGTTTCTCCAACATCATATGTCAGGCCTGCTAGAAATGCTTTTTCAGAGGTGAGAACATATGGCACGAGGTTTGACTCCCTTGGAGGTTCTGATGTCCAAATTCCTTGTGTGTCTTGGATTCGAAGAAGTCGTCCAAGGAAAGATATGACATCTCTTATGAAATTCCATCCAACTGCCATGAGTGAGACTGCAAAATTGAGTAATAAGCTCAATGAGCATACTTCTGATGCTGTTGGTGAGATTCCTGATAAAGTTTTCAAGTCTAGAATGCCTGCTAAGTTTCATCAACCATCTTCTTCTGAAGCTGAGAAAGAGAAGCACTGTTCAGTAGTAGGCACAATTGAGCCACGGCAGGAATTGAGGCCGAAAAGGGTAGATCCATCCGGCCATAGTTCAGATGACAACGTAGTTACTGTTCCCACTGCAAAAGGAGGGATGAGGAGGAAGCATCATCGTGCATGGACTCTTGTTGAGGTCATAAAATTGGTTGAAGGTGTGTCACGGTGTGGAGCAGGGAGGTGGTCTGAAATCAAACGGCTCTCCTTTGCATCATACTCATATCGTACATCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCAATGACACCTGCACCTGCTGATGAGGGGATAAATTCGCGGAAGCATGGTACGGCTCCAATTCCTGAGAAAATTTTACTACGTGTAAGAGAGCTTGCTGAGATGAATTCTCAGGTTCCTCCAAACATTAGCTCAAACAAGGTAGCAGCTGGTGCAGGGAGTGTGCGTGAAGTTAGATCAGGGTACCTGTAA 1965 0.4122 METVVGIEDNDDGKFEDSGLDRSSSALSSPKQISNPIVYKLVRVEGDGRLVPATDDEVMEVGDFLEYENSEMHVVADTGQSLECISIERSSSGKLRLECSEGSAEADLGKLNAKLQILQKVKEEEKQRISCGSPVHSHVNIDSQCSADKCPVMDEKVQSETPCQEIPSIASSLNYTHSNQSGSIDQCSRPSEGVIESGSSASAVHSNLKPDLSMSDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIIKDNKIVRKFVEESSRNMNVASLISSENMTEEEDINFKDSSAVNACGIDDNQVVSEIRLRNQNTEYGLEDENNQSEQRAAKRIRRPTKRYIEELSENESREQNPRLPISNKNTGLGHVSPTSYVRPARNAFSEVRTYGTRFDSLGGSDVQIPCVSWIRRSRPRKDMTSLMKFHPTAMSETAKLSNKLNEHTSDAVGEIPDKVFKSRMPAKFHQPSSSEAEKEKHCSVVGTIEPRQELRPKRVDPSGHSSDDNVVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAMTPAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNISSNKVAAGAGSVREVRSGYL* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00410 654 MobiDBLite consensus disorder prediction 507 530 - -
Lapu10g00410 654 MobiDBLite consensus disorder prediction 370 388 - -
Lapu10g00410 654 Coils Coil 108 128 - -
Lapu10g00410 654 MobiDBLite consensus disorder prediction 361 390 - -
Lapu10g00410 654 MobiDBLite consensus disorder prediction 340 356 - -
Lapu10g00410 654 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 532 591 IPR017930 -
Lapu10g00410 654 MobiDBLite consensus disorder prediction 337 356 - -
Lapu10g00410 654 ProSiteProfiles Myb-like domain profile. 540 587 IPR001005 -
Lapu10g00410 654 SMART sant 536 589 IPR001005 -
Lapu10g00410 654 CDD SANT_TRF 538 588 - -
Lapu10g00410 654 Gene3D - 527 637 - -
Lapu10g00410 654 Pfam Myb-like DNA-binding domain 539 587 IPR001005 -
Lapu10g00410 654 SUPERFAMILY Homeodomain-like 538 597 IPR009057 -
Lapu10g00410 654 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 636 - -
Lapu10g00410 654 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00410 Lapu-Chr10 6475731 6482862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00410 - - gmx:100775511 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00410 10 6475731 6482862 Lapu10g00410 10 6475731 6482862 ECH