Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00407 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGAGGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCAACAAATCCCCATGCTTCTGATTTATTTGCAACATCAACAGCTGCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCAGTGGTGTGCCCGAATCAGATGCTGAATTGAAGAGAGCAGGAGATCAGGACTCAAAGGTTTCGTCCAAGTCAAGTAAAGATGAAGATGTGAAAGTTATGGATTCACGGATACTAAGTTCAACAAATGGCCAATCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGATGTCTTTGCTAATGCAAATGGAGGTAATAATACTAATGCTAATGGAGGTAATAATGCTAATGCAAATGTAGGTAATAATATGCCACAACGAAGTCAAGCTTCAGAAGAGCTAGCAACATCTGGAATGGTGGATGGGGCTGTTGTGGTTGCTTCTGACAGTAAGCCTAGAAATATTAAGAGTTCTGATAGTGTAAATGATGAAAAGAGTAGTCATGCTTCCATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAGCAACAGTATTCCAAATTCAGAAAGCAATATAAAAAGTGAAACCTCTATTGATGCACTCGAGGAACCCACTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCACTAAGATGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAGTAGACAGACAATGTTTCTTAACTTGGAAGATGTTAAGCAAGCAGGTCCTATTAAGACCTCAACCCCTAGAAGACAGACTTTCTCGTCTTCTGTTGTAAGTCGTACAATAAAGGAAGTCCGCACTGTTCCTGCACAAGTTGAGCGTGTTGGAGTAGCTAAGGATCAGAAGCTTGCTGACACATCTTCTGGTGAAGGTGGCAACCATACTGAAGCTCATGAACCTAAATCTGATTGTAATGGCGATACTTCCGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGACAGAACCTCCTGCAGAGGCCAATTTACCACCCATTCCAAGACAGGGTTCATGGAAACAGTTGACAGATTCCAGGCAGCCGAAGAACACGCTCCATTCTAATAGGAAGTTGGGACTGAGTGGTCAAAGTTCCAATGATGTTAAATTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGACTCCTATCAGCAGCCAGTCCCAGGACACATCTGTTGAACGCCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGAGCTCAACTTTACAGTACTTGGGAAGAATCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGTGTGAAGGCAAATGAGTCGAGGGAAAGAGGATGGTATGATGTTAAAGTTCTTCCAGTGCACGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCCGGCCTGGATCAGTTAGATCCAAGCAGAACAGTTCATCTGTAGCTCAGGATGATGGGGAATTAGAAGTCACTGGACGAGTGGTTGGTACAGTTAGGCGTCACATACCTATTGATACCCGTGATCCCCCTGGTGCAATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGGTTGATGATGATCATATCATAAGAAAACTTCTAAGTGGAAGCATCTGGTACCTCACTGTTCTTGGTTCTCTTGCTACCACACAAAGGGAATATGTTGCCCTACATGCATTTCGTCGATTAAATTTGCAGATGCAAACTGCAATCCTTCAGCCTAGTCCTGAACACTTCCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTTACACAGAACTTTGTTGAATATCTGCGTAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCAGCTACGCACACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCATTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTACTAAAGCATGTAGCCCCTGAGAGCTACAAGCAAGTCAATGAGATCAATTCAGATAATGTCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTTCCAAAACCTAGAATGTTAGTCTGTGCTCCATCTAATGCTGCCACTGATGAGCTTCTTGCTCGTGTTCTTGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCTGATGTGGCTCGAGTAGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTTGAGCGCAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAGGCACAGTTGACTCAGCAGTTGCATTGTCTCCACAGAGAACTAAATGCTGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCAGAGATCAGAATCGAGATGCTTTGCTACAGAGCCTTGCCGCTGTTGTTGAAAACAGGGACAAGGTTCTAGTTGAGATGTCTCGCCTAGCTCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAATGAAGCAGAGATTGTGTTTACTACAGTTTCTAGCAGTGGCCGAAAGTTGTTTTCTCGCCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCTCCCCTCTCTCTTGGAGCAGCTCGATGTGTTCTTGTTGGAGATCCTCAACAGCTTCCCGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGTTGCCCAACAATGTTGTTGTCTGTGCAGTATAGAATGCACCCTCAAATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACAGATAGTGAAAGTGTGGCTAAACTGCCTGACGAGCCATACTACAAGGATCCTTTACTTAAACCTTACATATTCTATGATATCAGACATGGGCGCGAGTCTCACAGAGGGGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAAACAGTCAAGTCGTTGGGTGTAGGAAAAATTACTGTTGGCATAATTACTCCTTATAAGCTGCAGTTGAAATGCCTCCAGCGTGAGTTTGATGACGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAATACAGTAGATGCCTTCCAAGGTCAAGAACGGGATGTCATTATAATGTCTTGTGTGCGTGCATCTAGTCATGGTGTTGGCTTTGTTGCTGATATTCGTAGGATGAATGTTGCCCTTACGCGTGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCAAATGCTCTGGTGCAATCTGAAGATTGGGCCGCATTGATTAATGATGCAAAATCTCGAAATTGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTGCCCGGTAAGCCTTCTTCAAATATGAGGGGCATGAGATCAGCTGGACCAAGATATAGATCAATGGATATGCATATGGAGTCCAGGTCAGGAGCACCACCTGAAGATGATGAGAATATGGGTGCTCCAATCGGCTCCAGAAACGGGAACCATCGCCAATCACGGTTTTCAGTGGAGAATTCCTTAGATGATTTTGATCACGGGGGTGACAAATCCAGAGATGCTTGGCAGTATGGTATACAGAAGAAGCAGAACACATCTGGAACCATGGGAAAGAGAGACGTATGA 4173 0.4414 MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTHPSTNPHASDLFATSTAAQGIINNHAFSHASSVSGFQPFVRPKSSGVPESDAELKRAGDQDSKVSSKSSKDEDVKVMDSRILSSTNGQSTEREEGEWSDEDVFANANGGNNTNANGGNNANANVGNNMPQRSQASEELATSGMVDGAVVVASDSKPRNIKSSDSVNDEKSSHASIGLESNSSEQKSNSIPNSESNIKSETSIDALEEPTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRSRQTMFLNLEDVKQAGPIKTSTPRRQTFSSSVVSRTIKEVRTVPAQVERVGVAKDQKLADTSSGEGGNHTEAHEPKSDCNGDTSGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQPKNTLHSNRKLGLSGQSSNDVKLGNKKHLSIKKQTPISSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNSSSVAQDDGELEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRELNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDDVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSSNMRGMRSAGPRYRSMDMHMESRSGAPPEDDENMGAPIGSRNGNHRQSRFSVENSLDDFDHGGDKSRDAWQYGIQKKQNTSGTMGKRDV* 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00407 1390 PANTHER DNA2/NAM7 HELICASE FAMILY 225 1358 IPR045055 -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 68 243 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 559 575 - -
Lapu10g00407 1390 Coils Coil 883 903 - -
Lapu10g00407 1390 Gene3D - 1079 1285 IPR027417 -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 264 288 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 393 426 - -
Lapu10g00407 1390 Pfam AAA domain 698 1050 IPR041677 GO:0004386
Lapu10g00407 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 1282 IPR027417 -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 262 426 - -
Lapu10g00407 1390 Gene3D - 634 1078 IPR027417 -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 11 27 - -
Lapu10g00407 1390 CDD SF1_C_Upf1 1081 1270 IPR047187 -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 1352 1372 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 201 235 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 81 111 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 30 45 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 1 45 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 137 172 - -
Lapu10g00407 1390 FunFam P-loop containing nucleoside triphosphate hydrolase 1079 1285 - -
Lapu10g00407 1390 CDD DEXXQc_SETX 698 1080 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 557 576 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 301 319 - -
Lapu10g00407 1390 MobiDBLite consensus disorder prediction 1320 1390 - -
Lapu10g00407 1390 Pfam AAA domain 1057 1253 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00407 Lapu-Chr10 6450384 6458650 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00407 - K10706 gmx:100794516 2547.31