Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00402 ATGGCGGAAAGCGCATCACCCTCGTCCAAACCCTCACCAATGGACCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAACATGCCTTCGCCCTCGCTCCCTCCGCTTCCCCAAGACCAACACCAACAACACCAACAGCAGCAACAACAACAGCAAAATCTTCATCAACAGTTGAGTCCCCCTCAACAACAACAACAACAACAACCACAACCTCTCGTCTCGTCGCAAGCCATGAACACCATCAACGGCATCAACCCTATCTCCAATTTCCAACTCCAGCAGACGCTGCAGCGATCGCCTTCCATCTCGCGCCTCAATCAAATTCAGCCTCAGCAGCAGGCGCAGCAGCAACAGTTCGGCGTCATGCGCCAGCAGGCCGGATTGTACGGCGGACAGATGAGCTTCGCCGCCGCGGGCGGCGGTGCGGGCCAGCAGCAGCAGTTGGGCGGCTCCAATTTGTCGCGGTCCGCGCTGATAGGGCAGAGCGGACACTTCCCCATGTTGTCTGGTGCTGGCACGCAGTTTAACTTGCTCTCCTCGCCAAGGCAAAAAGGTGGGCTAGTTCAGCAGTCTCAATTCTCCTCAGGTAATTCGGCTGGACAATCACTGCAAGGAATGCAAGCAATGGGTATGATTGGATCACCAAATCTCTCCTCACAACTACGAGCGAATGGAGCCCTGGCTTATGCACAGCAGCTGCGAATGAGTCAGGGTCAAATCAGACAGCAAATATCACAGCAGAATTCACTTAACACTGGACAGGTTCAAGGTTTACCAAGGTCATCGTCCCTTGCTTTTATGAATTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAACCAGCTATGGTTCATAACTCCTTAACACAGCAACAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCACCATTGCGTCTTCAACAGCAGCAGAGGCAGCAGCTGGCTTCTTCTACTCAATTGCAACAAAACTCTATTAGCCTGAACCAACAACAATTGTCCCAGCTGATTCAGCAACAGAAATCGATAGGGCAACCTCAGCTGCATCAGCAGCAGCAACAACAGCAGCAGCCCCAACAGCTGCAACAACAGCTTATACATCAGCAGCCACAACAACAGTCTCAGCCACAGGCTTCTGTCCATCAACAGCAACAGTCTCCAAGGATGCCAGGACCTGCAGGCCAAAAGTCATTCAGTCTAACTGGATCACAACCAGATGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACTGAAGCAACAAATCAAGTCCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAAGGTACACTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTACAACTACACACGGTTGCATTTTGGCAAAACATAGAAAATCGTCAACTTTGGAGTCCAAGGATTTATTGCTGCACCTAGAGAAAAATTGGGATTTAACAGTTCCTGGATATTCGAGTGAAGAGAAGAAGTATCAAAGCAAACCTCAATTAAATGACCTCCACAAGAGGCGCCTAGATATGATTCGCACAATGATGGAATCCTCGGCCTCTGAGTCAAACATTAACAGCTCTAAAGAGTTGAGTAGACAGGGCATTTCTAATCCTATCCCTGTGGGAGCTCACCATCTAGTAAGACCCTTGAGTTCAGAGCAGTTGGTTTCTCATTCAGCTGGTTCTCAGATGCTACAGCAGATGACAAGGTTTTAA 1788 0.4966 MAESASPSSKPSPMDPQNPAPSSNPTIPSPSHNNMPSPSLPPLPQDQHQQHQQQQQQQQNLHQQLSPPQQQQQQQPQPLVSSQAMNTINGINPISNFQLQQTLQRSPSISRLNQIQPQQQAQQQQFGVMRQQAGLYGGQMSFAAAGGGAGQQQQLGGSNLSRSALIGQSGHFPMLSGAGTQFNLLSSPRQKGGLVQQSQFSSGNSAGQSLQGMQAMGMIGSPNLSSQLRANGALAYAQQLRMSQGQIRQQISQQNSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLTQQQWLKQMPAMSGPASPLRLQQQQRQQLASSTQLQQNSISLNQQQLSQLIQQQKSIGQPQLHQQQQQQQQPQQLQQQLIHQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSTTTHGCILAKHRKSSTLESKDLLLHLEKNWDLTVPGYSSEEKKYQSKPQLNDLHKRRLDMIRTMMESSASESNINSSKELSRQGISNPIPVGAHHLVRPLSSEQLVSHSAGSQMLQQMTRF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00402 595 MobiDBLite consensus disorder prediction 356 437 - -
Lapu10g00402 595 CDD TAF12 438 506 IPR003228 GO:0005669|GO:0006352
Lapu10g00402 595 MobiDBLite consensus disorder prediction 304 326 - -
Lapu10g00402 595 Pfam Transcription initiation factor TFIID subunit A 439 506 IPR003228 GO:0005669|GO:0006352
Lapu10g00402 595 MobiDBLite consensus disorder prediction 540 561 - -
Lapu10g00402 595 MobiDBLite consensus disorder prediction 1 81 - -
Lapu10g00402 595 MobiDBLite consensus disorder prediction 44 81 - -
Lapu10g00402 595 Gene3D Histone, subunit A 433 507 IPR009072 GO:0046982
Lapu10g00402 595 MobiDBLite consensus disorder prediction 311 326 - -
Lapu10g00402 595 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 92 552 IPR037794 GO:0000124|GO:0005669|GO:0046695
Lapu10g00402 595 FunFam Transcription initiation factor TFIID subunit 12 433 508 - -
Lapu10g00402 595 SUPERFAMILY Histone-fold 436 507 IPR009072 GO:0046982
Lapu10g00402 595 MobiDBLite consensus disorder prediction 540 558 - -
Lapu10g00402 595 MobiDBLite consensus disorder prediction 12 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00402 Lapu-Chr10 6397609 6406866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00402 K03126 - gmx:100783017 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00402 10 6397609 6406866 Lapu10g00402 10 6397609 6406866 ECH