Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00399 ATGGCGGAAAGCGCATCACCCTCGTCCAAACCCTCACCAATGGACCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCACTTCCCCTTCCCACAACAACATGCCTTCGCCCTCGCTCCCTCCGCTTCCCCAAGACCAACACCAACAACACCAACAGCAGCAACAACAACAGCAAAATCTTCATCAACAGTTGAGTCCCCCTCAACAACAACAACAACCACAACCTCTCGTCTCGTCTCAAGCCATGAACACCATCAACGGCATCAACCCTATCTCCTTGAGGAGGAGAAACAGGGATTATTCTGAAGGAAGCGCATCACAGAGCAGTGAACTGAGGACAATGTCTGCTGAATCGCCAAATTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAGCAATCCAAGTTCAAGATAGCAGGAACTGATAAATTTGCTAAAGTGATAGACTTTCTTCGCCGGCAGCTTCACAGGGAGACGTTGTTTGTGTATGTGAATAGTGCTTTTTCACCAAACCCTGATGAATTGGTCATTGATCTGTTTAATAATTTTGGTTTTGATGGCAAACTGGTGGTCAACTATGCTTGCTCCATGGCGTGGGGCTAA 627 0.4785 MAESASPSSKPSPMDPQNPAPSSNPTITSPSHNNMPSPSLPPLPQDQHQQHQQQQQQQQNLHQQLSPPQQQQQPQPLVSSQAMNTINGINPISLRRRNRDYSEGSASQSSELRTMSAESPNSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00399 208 FunFam Ubiquitin-like protein ATG12 119 208 - -
Lapu10g00399 208 SUPERFAMILY Ubiquitin-like 124 207 IPR029071 -
Lapu10g00399 208 Pfam Ubiquitin-like autophagy protein Apg12 125 208 IPR007242 GO:0000045|GO:0005737
Lapu10g00399 208 Gene3D - 119 208 - -
Lapu10g00399 208 MobiDBLite consensus disorder prediction 44 92 - -
Lapu10g00399 208 PANTHER AUTOPHAGY PROTEIN 12 113 208 IPR007242 GO:0000045|GO:0005737
Lapu10g00399 208 MobiDBLite consensus disorder prediction 103 120 - -
Lapu10g00399 208 CDD Ubl_ATG12 125 207 - -
Lapu10g00399 208 MobiDBLite consensus disorder prediction 1 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00399 K08336 - gmx:100527733 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00399 10 6358962 6364540 Lapu10g00399 10 6358962 6364540 ECH