Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00393 ATGAAGAACAGGATTGTGATCGTTTTAATTTCAGCTCTTGTTTCATCCATTTCCCATGCTTCTCATCTGCAAGATTTCTGCATAGCAGACCGCAGACGTCCAGATAGCCCTTCTGGTTATCACTGCTTGCCGTCTGATACAGTAACAGCAGAAGACTTTAAGTTCAGTTTTGGGCAACGCATTCCAGTCCCAACCAAAACTGTACTATACCCTGCGTCTCTTAACGAGTTTCCTGCTCTCAATGGACTTGGCATTTCTGCAGGACTTGTAGAGATGGAGATAGGAGGATCTCTGCCAGTGCACTTACATGCTGCAGATGAAATACTGATAATAAGTCAAGGTGAAATGACTGTTGGAACCTTGACACCTACCAGAGCTTATGTCAATACACTCAAACCAGGAGATCTTGTGGTCTTCCCAAAAGGACTTCTGCATTATCTTCTCAATTCTGGTAAGGAGAAAGCCCTTGCTTATGCCTTTTATAATAACCCTAACCCTCGTCTCCATTTTGTTCATCGAATGTTATTTGGCAACAATGTCTCTACCTACACCATGTCCCAAGTCACCTTCCTTGATGAACCCCAAGTGAAGAAGCTCAAGGTTCGTTTCAATGGCACCGGCTAG 624 0.4391 MKNRIVIVLISALVSSISHASHLQDFCIADRRRPDSPSGYHCLPSDTVTAEDFKFSFGQRIPVPTKTVLYPASLNEFPALNGLGISAGLVEMEIGGSLPVHLHAADEILIISQGEMTVGTLTPTRAYVNTLKPGDLVVFPKGLLHYLLNSGKEKALAYAFYNNPNPRLHFVHRMLFGNNVSTYTMSQVTFLDEPQVKKLKVRFNGTG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00393 207 CDD cupin_OxOx 19 203 IPR001929 GO:0030145
Lapu10g00393 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 15 200 - -
Lapu10g00393 207 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Lapu10g00393 207 PRINTS Germin signature 162 177 IPR001929 GO:0030145
Lapu10g00393 207 PRINTS Germin signature 129 149 IPR001929 GO:0030145
Lapu10g00393 207 SUPERFAMILY RmlC-like cupins 69 205 IPR011051 -
Lapu10g00393 207 Gene3D Jelly Rolls 18 207 IPR014710 -
Lapu10g00393 207 Pfam Cupin 68 169 IPR006045 -
Lapu10g00393 207 SMART Cupin_1_3 53 197 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00393 Lapu-Chr10 6300383 6301160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00393 1 206 Miscellaneous Gene Families AT5G20630 40.094 2.23e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00393 - - vra:106773097 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00393 10 6300383 6301160 Lapu10g00393 10 6300383 6301160 ECH