Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00379 ATGGCTGACTACTTCTCCAGCTCCGTCGAATTCGGACTCAACCTATCGAAGCGAGTTTACTACGGCAAAGGATCGGCTCCTCCGCCGGTTCCTTCGATGTCACGGTCGCCGGAGGGATTCCTCCCGACGGCGCCGATGTGCTACGCGGTGATATCCGATCCGGAAAAGGTCGAGAATCCGGACATTCGGAGTTACCAGCCCTACGTGCACGGCCAGTGCGAGCCTCCGGCGCTGATACCGCTTGAGCTTCACGGCGTCGCCATGGAAGTGGAGTGCTCCTTGGACACGGCGTTTGTAACGGTCACCGGAAAGTGGCGCGTGCATTGCGTGACCGGAAGTAGTAAGTGTGATTGCCAGGTCGCCATACCTATGGGTGAACAGGGTTCACTTCTAGGTCTAGAGGTTGATGGTTCTGGAAGAACTTATCGTACTGAATTGATCTCCCTGAAAGATGAAATGGATAAGGATAAAGTGGCAAAAGCTAAAGATGGATACTTCTTGAAAAGCCATATATACACCGTTAAGATTCCACAGTTTAGGGGAGGCTCCGTGTTCTCAACTAAAATCAGATGGTCCCAGAAAATATTATTTCGTGATGGCCAGTTATCTCTCTGTGTCCCTTTCAGCTTTCCGTCATACGTCAACCCAGCTGGAAAAAGAATTTCTAAAAAAGAGAAGATACTTTTGAAAGTGAATTCTGGTTCTGCAACGGAAGTGTTATGCAAAACCACGAGTCATCCTCTAAAGGAACTACTGCGCCAAGCTGGCAAATTAAATTTATCATATGAAGCGGAAGTGTCAGCATGGTCAAGTACAGACTTCAGTTTCTCGTACTCGGTTTCTTCAAATGACATATTTGGAGCTGTTCTCTTGCAATCTCCATTCCTGCGTGATTTTGACGAAAGAGAGATATTTTGTTTGTATCTTTACGCGGGAAACCGGCAGGGCAGAAAGGTTTTTAAAAAGGATGTGGTGTTTATGGTAGATATAAGCGCAAGCATGAAGGGAAATCCTCTCGATAACACAAAGAATGCCCTACTGACATCACTCTCTCAACTAAATGCACAAGATACATTTAACATTATAGCTTTCAACGGAGCGCTCTACTTATTTTCGTCATCAATGGAAACAGCTACAGAGGAAGCAATTTTAAATGCTACGAAGTGGGTTGACACTAATTTTATTGCTAATGGTGACACTAATATCATGCTTCCCTTAACACAGGCAATGAAGCTACTTGAGAAATCAACTGATTCGGTCCCTCTTATTTTTCTCGTTACTGATGGGGCTGTTGAGGATGAGAGAGATATATGCAATTTTGTGAGAAGCTATGTCTCCAGTGGGCAATCAGTTCCAACACCGCGCATATGTACCTTTGGCATAGGTTTATATTGTAATCACTACTTCCTGCAAATGCTAGCACAAATTGGGAGGGGCCACTATGATTGTGCTCATGATTTAGATTCAATTGAATTTAGAATGCAAAGGCTATTTAGTACAGTTTCATCAGTTATGGTTGCTGATGTAACCATCGAAAGTTTAGAAGGTCTCGATTCACTTGAGTTATTCCCGTCTCGTATACAAGATATATCATCTGGAAGTCCGTTGATCCTATCAGGCAGATACAGTGGAACTTTCCCCGAATTAGTTAAAGTCACCGGTACTTTGGCAGATATGACTAACTTCGTAGTAGACCTTAAAGTGAAAAGAGAGAAGGATATACAGCTCAGTAACGTTCTTTCAAAGAGACATATAGACATGGTCACTGCACAAGCCTGGTTATTGCAAAGTGAAGAGCTAGAGGAGAAGGTTACAAAAATGAGTATTCAAAATAAAGTCCTGTCAGAGTATACCTGCATGAACATGGTTCTTGTACAGAGCGATGAAGGGAAGAAAGCACCTGAACAATTTATGTTACAAAAGGCATACAACAAACTTAGCTTCCAGCGGTTGGAATTCAACAACCAGAAGTTATTCCTTGGAGGACTGAGTCTTGGATTTGGTGACTCGAAAGCAACTGCTGAGAATTTGCCGCCAGCTATAAAGGAAGCAAAACCACCTGAAGGACTGCTGGGGAAGGCTGCCTCCACCTGTTGTGGCCGATTGGCTGATACCTGTTGTGGCATGTGTCTTCTGCAGGCTTGCACTTTTGTGAATGACCAGTGCACCATTGTTTGCACTCAACTTTGTGCAGCCCTGGCCTGCTTTGAGTTAATCAAATGCTGTGTTGAGCTATGCGAGTGTGATTGTTTGTAG 2256 0.4419 MADYFSSSVEFGLNLSKRVYYGKGSAPPPVPSMSRSPEGFLPTAPMCYAVISDPEKVENPDIRSYQPYVHGQCEPPALIPLELHGVAMEVECSLDTAFVTVTGKWRVHCVTGSSKCDCQVAIPMGEQGSLLGLEVDGSGRTYRTELISLKDEMDKDKVAKAKDGYFLKSHIYTVKIPQFRGGSVFSTKIRWSQKILFRDGQLSLCVPFSFPSYVNPAGKRISKKEKILLKVNSGSATEVLCKTTSHPLKELLRQAGKLNLSYEAEVSAWSSTDFSFSYSVSSNDIFGAVLLQSPFLRDFDEREIFCLYLYAGNRQGRKVFKKDVVFMVDISASMKGNPLDNTKNALLTSLSQLNAQDTFNIIAFNGALYLFSSSMETATEEAILNATKWVDTNFIANGDTNIMLPLTQAMKLLEKSTDSVPLIFLVTDGAVEDERDICNFVRSYVSSGQSVPTPRICTFGIGLYCNHYFLQMLAQIGRGHYDCAHDLDSIEFRMQRLFSTVSSVMVADVTIESLEGLDSLELFPSRIQDISSGSPLILSGRYSGTFPELVKVTGTLADMTNFVVDLKVKREKDIQLSNVLSKRHIDMVTAQAWLLQSEELEEKVTKMSIQNKVLSEYTCMNMVLVQSDEGKKAPEQFMLQKAYNKLSFQRLEFNNQKLFLGGLSLGFGDSKATAENLPPAIKEAKPPEGLLGKAASTCCGRLADTCCGMCLLQACTFVNDQCTIVCTQLCAALACFELIKCCVELCECDCL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00379 751 SUPERFAMILY vWA-like 322 497 IPR036465 -
Lapu10g00379 751 Gene3D von Willebrand factor, type A domain 321 500 IPR036465 -
Lapu10g00379 751 ProSiteProfiles VWFA domain profile. 323 501 IPR002035 -
Lapu10g00379 751 CDD vWA_interalpha_trypsin_inhibitor 320 496 - -
Lapu10g00379 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 749 - -
Lapu10g00379 751 SMART VWA_4 321 495 IPR002035 -
Lapu10g00379 751 Pfam von Willebrand factor type A domain 322 483 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00379 Lapu-Chr10 6120269 6132204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00379 - - gmx:100807956 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00379 10 6120269 6132204 Lapu10g00379 10 6120269 6132204 ECH