Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00369 ATGGAAGAAGAAATGACGATGGACACTTCTCCCAATCCCGGTGATAGTTACTTCGATCCTCAGAACCTCTCTTCGCGACAGCGGTTCCGCAGATACGGGAAGAGGCACTCAACTTCAGGTGCTTCAATCCAACTGGACAACTCGGTGTCCAAGTTGAGTGAAACTGGGTTGTTATATGATGGCCAAAGCATCCATAGTCCTACTAATGCGGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTACTTGGAAGAGAAGACACCATATTCCACTAGGAGGAGGTTGTCTGCTGACATTCCTGGTGTCCCTGGTGTGGATGCTGGTTTTGATTCTGTACGCTACTCATTAAAGGCTTGTAAGACAGAGGGTGACTTGTTGGGAGATAGTGCAGACTCAATCTTTACTTTGTTTGCATCTTTGCTTGATTCTTCTTTGCAAGGACTGATGCCTATTGCTGATCTGATACTAAGAGTTGAGAATGCGTGTCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATGTAAGGCATCGAGTTGTGGAGGACAAATTGATGAGGCAGAAGGCTCAACTTTTGCTTGATGAGGCAGCAACATGGTCTCTCTTGTGGTTCCTTTATGGGAAAGTGACTGAAGAACTATCTAAAGATCAAATACTGGTGTCGGGAACCTCACATGTGGTGGCTTGTGAGTTTGTTGCTGAGGATCATACAGCTCAATTGTGTCTTCGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCGAAGGTGCGTGGATCTCATGTGGGTAGTTATCTGCCCAACTGTGGAGTTTGGCATCATACTCAACGTTACCTAAAGAAAGGAACTCTCGACATGAATGTTGTTCATCACTTGGACTTTGATGCTCCAACTCGTGAAAATGCTAATCTTTTGCCTGATGACAAGAAACAAGATGACTCTCTTCTAGAAGATGTGTGGACTCTTTTAAGGGCTGGAAGGCTAGAAGAGGCTTGTGGACTTTGCCGGTCTGCTGGACAGCCATGGAGAGCTTCTTCTCTTTACCCATTTGGAGGCTTGAACCAGTTTCCCTCTGTTGAAGTTCTGGTCAAGAATGGTAAAAATAGAACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCGTATTGTGCATCAGAGAAAATAGCAGAGCAAGGAGGGAAATGTGAAGCAGCTGTATATGCAGCCCAGTGTAGCAACCTAAAACGGATGCTTCCACTCTGCAATGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTGGACTTGGAAATCACTCGTTCACTGCCAGGGGGAGTTGATCAACTTAGAACTTTCGGAGATGTAATTGATGGAAGCCCTGGACATGCTGATGGTTCCTTTGAGCCCTCTCATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAACAACCTCGACAACTCTCATCTCTTCTTCAAAAACTTCATTCAGGGGAAATGATCCATGAAGCTGTTACTAGACAATGCAAGGAGCAACAGCGACAAATTCAGATGACTTTAATGCTAGGGGACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTACTGAAGATAATCAGAATGTATTTAGGCCGTGTGGAGATCCTCAAATGATACGATTTGGTGCACATCTGGTCCTTGTGCTTCGATATTTACTTGCTGAGGAAATGAAGGACACCTTCAAGGACAAGATTCTGAGTGTTGGTGATAATATTTTGCACTTGTATGCCCTATTTCTCTTTTCAAAGGAGCATGAAGAGTTAGTTGGCATATATGCTTCTCAGCTTGCATGTCACCGTTGCATTGATCTCTTTGTGCACATGATGGAGCTTAGGCTGAACAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTACCATTTTCTTCTCTGGATGATTCCAAGGGAAATTTTGAAGACATTATTGAGAGAATTTTGTTGAGATCCCGAGAGATCAAGGTTGGAAAATACGATAACTTGTCAGATGTTGCAGAACAACACAGACTGCAGAGTCTTCAAAAAGCTAAAGTCATCCAATGGCTTTGCTTTACACCACCATCAACAATTACTAATGTCAAAGATGTCAGTAAAAAGCTTCTTCTTCGAGCACTGGTTCATAGCAATATACTCTTCAGGGAGTTTGCTTTGATTTCTATGTGGAGAGTGCCAGCAATGCCAATAGGTGCCCACACAGTACTTGGCTTTCTTGCTGAACCCTTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGCGAGAGTATTACTCCTGTGACGCAACCTACCGCAATTGGCTTAAAATTGAAGTGGAGAATGCCGAGGTTCCTGTCACTGAACTGTCACTAGAGGAAAAGGAAAGGTCCATCTCAGCTGCCAAGGAAACATTGAATGCATCCCTTTCACTGCTACAAAGAAAAGAAACACCTTGGTTGGCTTCAACGGATCGCGTGTATGAATCAGCCGAACCAGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCCTGCCATCTGGAGAGTGTTTGTGTCCAGATGCTACTGTTTGTACTACACTTACGAGTGCTCTCTACTCTTCAGCTGGTGATGAGGTTGTATTGAATCGACAACTGATGGTGAATGTTTCCATATCTTCAAGGGACAGTTATTGCATTGATGTCGTTCTTCGTTGCTTAGCAATTGCTGGTGATGGACTTGAACCGCATGAACTTAATGATGGTGGTATTCTTGGCACCATCCTGGCTTCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACAATGGAAATATCCCGTTTGGATGCTTGGTATTCTGACAAAGATGGAACCTTAGAGTGCCCGGCAACATACATAGTAAAAGGACTTTGTCGTAGGTGCTGCCTTCCAGAAGTCATTCTTCGTTGCATGCAAGTATCTGTTTCTCTAATGGGATCGGGAGTCCTGCCTGACTGTCATGATACTTTGATAGAGCTGGTTGGCGGTCCTGAAACTGACTTTCTCCACTTGTTTAGTCAACAACAGTTACAGGAGTTTTTATTGTTCGAGAGGGAATACTCAATCTGCAAGATGGAGATTACAGAGGAATGA 3255 0.4359 MEEEMTMDTSPNPGDSYFDPQNLSSRQRFRRYGKRHSTSGASIQLDNSVSKLSETGLLYDGQSIHSPTNAALVLENIKQEVESLDADYLEEKTPYSTRRRLSADIPGVPGVDAGFDSVRYSLKACKTEGDLLGDSADSIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNVRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKVTEELSKDQILVSGTSHVVACEFVAEDHTAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPNCGVWHHTQRYLKKGTLDMNVVHHLDFDAPTRENANLLPDDKKQDDSLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSLYPFGGLNQFPSVEVLVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGHADGSFEPSHGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPCGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVGIYASQLACHRCIDLFVHMMELRLNSSVHVKYKIFLSAMEYLPFSSLDDSKGNFEDIIERILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIEVENAEVPVTELSLEEKERSISAAKETLNASLSLLQRKETPWLASTDRVYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIAGDGLEPHELNDGGILGTILASGFKGELPRFQAGVTMEISRLDAWYSDKDGTLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVGGPETDFLHLFSQQQLQEFLLFEREYSICKMEITEE* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00369 1084 Gene3D - 283 432 - -
Lapu10g00369 1084 FunFam Nuclear pore complex protein 703 871 - -
Lapu10g00369 1084 Gene3D - 704 897 - -
Lapu10g00369 1084 PANTHER NUP107-RELATED 21 1082 IPR007252 GO:0005643|GO:0017056
Lapu10g00369 1084 MobiDBLite consensus disorder prediction 1 22 - -
Lapu10g00369 1084 Pfam Nuclear pore protein 84 / 107 198 871 IPR007252 GO:0005643|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00369 K14301 - gmx:100786552 2070.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00369 10 5994134 6018781 Lapu10g00369 10 5994134 6018781 ECH