Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00355 ATGAGCAGATTTGGTGATTCGTTGAACTTGGATTTGGCTGCTGCTGCTGTGAACAGCCTCTTCAATATTCCTGAAACAATGGAAAAGTTCATGTTTCCTTCTTCTCGTGCTCATGACCATCACGAGACCAGAGGGGTTTCTAGCATCATTCCAGTGGACATTTTGGACACTCCGAAGGAATTTATATTCTTCATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGACAGTTGAAGATGAGAGCACCCTTGTAATACGAAGCAATGGGAAGAGGAAACGCCATGATGGGGATGATGAAGGGTGCAAGTATCTTAGGCTGGAGAGGAGAGGGCCACAGAATTTGCTGAGGAAGTTCCGTTTGCCAGAGAATGCCAATGTGTCGGCAATAACAGCTAAATGCGAAAATGGGGTTCTGACTGTAGTTGTTGGGAAGCATCCTCCTCCCAAATCCAAATCTGTTGAAGTTGCTATTGCCTGA 483 0.4555 MSRFGDSLNLDLAAAAVNSLFNIPETMEKFMFPSSRAHDHHETRGVSSIIPVDILDTPKEFIFFMDVPGLSKSEIQVTVEDESTLVIRSNGKRKRHDGDDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKCENGVLTVVVGKHPPPKSKSVEVAIA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00355 160 SUPERFAMILY HSP20-like chaperones 28 159 IPR008978 -
Lapu10g00355 160 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 15 157 IPR031107 -
Lapu10g00355 160 CDD ACD_sHsps-like 53 146 - -
Lapu10g00355 160 Gene3D - 13 159 IPR008978 -
Lapu10g00355 160 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
Lapu10g00355 160 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 160 IPR002068 -
Lapu10g00355 160 FunFam 17.4 kDa class III heat shock protein isoform A 10 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00355 Lapu-Chr10 5877880 5878861 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00355 K13993 - gmx:100803161 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00355 10 5877880 5878861 Lapu10g00355 10 5877880 5878861 ECH