Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00352 ATGGATTCAAATTCAACAAAGGAGAAGCTGCAGAACAGTGTTGCTGTTGCAGATGGAGCTGACCTTAAGTCTTGTTATATGCAGAAGTTCAGGCTCTACGAGACTCGCTCGAAATTCTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCATCTGAATTGAATATAGTTGAAGATTCAACAATATACTCAGAAATTGAGTGTTGTGACCTTCTCAGGCGGATACATGAAGGAAACAAGTCTACTGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATATTACATGCTGCTTATAACAAAGCGGAGGAAGATCGGCACAATCTGTGGTCACACTATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATGCTACCATGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGCTTAGTCTTCAACGCAACTTATCTGATCATAATACTACAGGGCAATCACTCTATGAAACCCTTTTTGTTTGGAATGAGTTCTTGACACGAGGAATCAGGAATATTCTCCAGAATACTTCATGGACTGTAGCCTTAGTATATGGCTTTTTTAAGCAGGTCAAACTTTCTATATCTGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTAAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTCACAGAAGCTCGTGATGGACACCCTATGCAAATAAGTTCGGTGGTGCAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCGGACATTATATTATCAAGAAAGGACTCTAATTTTGAGGCCACAAGACTTCATTTTGATAATCTTGTCAAAAGATACGGAAATCCAATTATTATACTGAACTTGATAAAGACACGTGAGAAGAAGCCTCGAGAAACCATTCTGCGAGCCGAGTTTGCGAATGCTGTTAGGTCCATTAATAAAAATTTGAAAGGGGAAGATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTATTGGGACAGCTGGGAAAAGTGGCCGCATACGCCCTGAAGCTGACTGGCATCTTCTACTCTCCAGTGACACCAAATATGAGGCTAGATGGATTATCCCAATATTTCTACTCTGAGAATAACAATGTCATTGATCACTGCATCAGAGAAGAAGCCAGCATAAATAAGAACAAGGTGGATAAAGAAACAGAAATTAGCAGTTGTTATTATAGGGATGATGAGAACAAAGATTACAGTGTCAAACCCCAGATGCTTCAATCTGGGGTGTTGCGGACTAATTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTGGCTGCACTTGGATGCCAGCTTCAAGTTTTAGGATTTATTGAATCCCCACATATTGATCTTGATAACCCTTTGGCCGAGGAATTAATGGAAGTATACGAGTCCATGGGCGACACATTAGCTTTTCAATATGGGGGTTCTGCAGCACACAACAAGGTAATATCTCTAATATTTTCTGAGAGAAGAGGACAATGGAAGGCAGCAACACAGTCCCAGGAATTTATTCGAACCCTACAGCGCTATTACAACAACACATATGTAGATGGTGATAAGCAAAAAGCAATTAACTTATTCTTGGGGCATTTTCAGCCACAGCAGGGAAAACCAGCACTGTGGGAGCTAGATTCAGATCAGTATTACACTGTCAAAAGACATGGCCTTTATTTAGCAGATGGCAGCGTTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTCAGTGAAAGTGACACTACAATTAGGAACTTGAATGATACAAATTGTCAGAGTTCATCTGAAAAACCTGATAAGCGTTTCCTTTCGGGATCTACTCCAGACATCTTTACTTGTGGAAGTGATATTTGTCATTGCAGGCAGATATATGGAGGAATGGTCAAGGGCCAAAAATGTGAGAGTGATCATATTTGTTACGATGAACATGGAGATGCATGTGACTGCTCCAACTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATGGCAAATGAATTAATAACTACTGAGACATCGGCTAGTGAATCTGGATCCAGCCTTAAGGGAAGGCAGAGTGGAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAAGCTTTGAACGTTGGGTGACTGAAGGGGAGATGCATTTTGTTTGA 2454 0.4075 MDSNSTKEKLQNSVAVADGADLKSCYMQKFRLYETRSKFYMIGRDKNRTFWRVLKIDRLEPSELNIVEDSTIYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMVPIPHATMRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMLSLQRNLSDHNTTGQSLYETLFVWNEFLTRGIRNILQNTSWTVALVYGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQIRGSIPLFWSQEASRLNIKPDIILSRKDSNFEATRLHFDNLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKNLKGEDRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMRLDGLSQYFYSENNNVIDHCIREEASINKNKVDKETEISSCYYRDDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGCQLQVLGFIESPHIDLDNPLAEELMEVYESMGDTLAFQYGGSAAHNKVISLIFSERRGQWKAATQSQEFIRTLQRYYNNTYVDGDKQKAINLFLGHFQPQQGKPALWELDSDQYYTVKRHGLYLADGSVRSTITRSLSDGNILSESDTTIRNLNDTNCQSSSEKPDKRFLSGSTPDIFTCGSDICHCRQIYGGMVKGQKCESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENMANELITTETSASESGSSLKGRQSGEELNKDRKYSESFERWVTEGEMHFV* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00352 817 MobiDBLite consensus disorder prediction 775 790 - -
Lapu10g00352 817 MobiDBLite consensus disorder prediction 775 801 - -
Lapu10g00352 817 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 14 781 IPR043573 GO:0043813|GO:0046856
Lapu10g00352 817 ProSiteProfiles Sac phosphatase domain profile. 166 561 IPR002013 GO:0016791
Lapu10g00352 817 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00352 Lapu-Chr10 5853635 5864752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00352 27 813 Acyl Lipid Metabolism Gene Families AT5G20840 55.814 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00352 K22913 - gmx:100806380 1500.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00352 10 5853635 5864752 Lapu10g00352 10 5853635 5864752 ECH