Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00349 ATGTTCTTCCTCGTGTTCTTCTTAGCTTTTGTGTCTCATATCCATGGAAGCAAGATCGAACATAGAAGCATCAAACATGTTCCCCTCTTCATTTTTGGTGATTCTTTCTTAGATGCTGGCAATAACAATTACATCAACACTACAGCTCTCGACCAAGCAAATTTCTGGCCCTATGGGGAAACATACTTCAAGTTCCCAACAGGGAGATTCTCTGATGGACGGTTGGTATCAGATTTCATAGCTGAATATGCAAACCTGCCATTGGTTCCACCATATTTACAACCTGGCAATAGCCAATACTATGGAGGAGTGAATTTTGCTTCTGGTGGAGCTGGTGCTCTTGTTGAAACTTTTGAAGGGTCGGAAATATACAAGAGAGGGGCTAGAAAATTTGTGTTCATGAACTTGCCACCATTGGGTTGTCTTCCAGGCACCAGAATAATTCATGCAGAAGAAAATGGTAAATGCTTACAAGAACTTTCAGCCCTTTCAAGTTTACATAATCGAGTTCTACCAGTGGTTCTCTTGCGATTGGAGAAGCAATTAAAGGGCTTCAAATTTGCACTGTATGATTTCAGCACTGATCTCACTCAAATGATGAACCATCCCTTGAAATATGGTTTGAAGGAGGGAAAATCAGCATGTTGTGGAAGTGGAGCAATGAGAGGAGAGTATAGCTGTGGAGGGAAACGAGGGAAGAAGGAATTTGAATTGTGTAAGAAACCAAACGAGTATTTATTTTGGGACTCTTATCATCTCACAGAAAGTGCTTACAGAAACATTGCAGATCGTATGTGGGGTTTTACCAACACTTCTTACAATATAGGGCCTTACACTGTCAGAGATCTCTTCCAACTTCCATGA 864 0.4097 MFFLVFFLAFVSHIHGSKIEHRSIKHVPLFIFGDSFLDAGNNNYINTTALDQANFWPYGETYFKFPTGRFSDGRLVSDFIAEYANLPLVPPYLQPGNSQYYGGVNFASGGAGALVETFEGSEIYKRGARKFVFMNLPPLGCLPGTRIIHAEENGKCLQELSALSSLHNRVLPVVLLRLEKQLKGFKFALYDFSTDLTQMMNHPLKYGLKEGKSACCGSGAMRGEYSCGGKRGKKEFELCKKPNEYLFWDSYHLTESAYRNIADRMWGFTNTSYNIGPYTVRDLFQLP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00349 287 CDD SGNH_plant_lipase_like 29 266 IPR035669 -
Lapu10g00349 287 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 122 285 IPR044552 -
Lapu10g00349 287 Pfam GDSL-like Lipase/Acylhydrolase 29 113 IPR001087 GO:0016788
Lapu10g00349 287 Pfam GDSL-like Lipase/Acylhydrolase 122 264 IPR001087 GO:0016788
Lapu10g00349 287 Gene3D SGNH hydrolase 122 275 IPR036514 -
Lapu10g00349 287 Gene3D SGNH hydrolase 24 121 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00349 Lapu-Chr10 5822098 5826665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00349 119 266 Acyl Lipid Metabolism Gene Families AT4G10950 28.859 2.84e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00349 - - pvu:PHAVU_010G124800g 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00349 10 5822098 5826665 Lapu10g00349 10 5822098 5826665 ECH