Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00344 ATGCTTCCAAAGTTCATAGTTAGCCCCTTTAAACTGGAACACCAAGAAGGGAAGCATGCCAACAAAAGAAGAAAACATGCGAGATCATTTGACAGTACTAACATGGATGTTGGTTTGAGACTTCTCCCTCAAATCACCAGCTCAAAGAGCACATCAAATGTCCTCTTGAAATCTGCAATGAGAAAGCCAAACCAATCCGTCCCTCAAGACTTCTGCTTCCTCAAAACTTGCAATCTATGCAATAAGCAGCTCAGTCCAGACAAAGATATTTACATGTACAGGGGAGATCAAGGTTTCTGCAGTGTAGAGTGCCGCAGCAGACAAATAGTTTTGGATGAGATGAGAGAATTAGAAAGCTCTACCAAGCACATGGTAGCATCTTATAGAAAATGTTGTAGTGAGGCACGTCGAGAGACTCGCCTTATACTTGAGGACCTTCGAATGCAGAGACTCAAATCTAGAGTCTAA 468 0.4231 MLPKFIVSPFKLEHQEGKHANKRRKHARSFDSTNMDVGLRLLPQITSSKSTSNVLLKSAMRKPNQSVPQDFCFLKTCNLCNKQLSPDKDIYMYRGDQGFCSVECRSRQIVLDEMRELESSTKHMVASYRKCCSEARRETRLILEDLRMQRLKSRV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00344 155 ProSiteProfiles Zinc finger FLZ-type profile. 72 116 IPR007650 -
Lapu10g00344 155 Pfam zinc-finger of the FCS-type, C2-C2 70 114 IPR007650 -
Lapu10g00344 155 PANTHER FCS-LIKE ZINC FINGER 17 10 152 IPR044181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00344 Lapu-Chr10 5762799 5764192 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00344 - - gmx:100816015 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00344 10 5762799 5764192 Lapu10g00344 10 5762799 5764192 ECH