Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00340 ATGGGAAAAGTTCGTCCCCAAACACTACATTCTTCTGCTACTACTTGCAATTTCACTTGCAAGCAAGAGACTTTTACCCTATGGATGAAATCTCTTGTACTGAATGGAAAGGGATGTACTGTCTTTGATTCCAATGGCCAAATTGCATACCGAGTTGATAACTACAACTGCAAGCATAGAGATGAAGTTCATCTCATGGACCAAAATGGTGATATTTTGTTCACTATGCTAAAAAAGCAATATAAGTTGTCCAGATTCTGGGAGGGTTATAGATTTCCTGCAACAAGAAATGACCACAAAGGACCATGCTTTCGAGTTTCAAAAACTTATAAGATCTCTAGAGGGGGTTCCATCTATGAAGTTGAACTTGGTTTGGACAAAAATCAACCATATATTCACAAAATAGAAAGCAGCACCTACAATTCAGCTTGCAAAATTTCTAATGAGGTTGGGGTGGTAGTTGCAGAGCTAAGGAGAAAGAAGTCACGTTGTGGAGTTGATTTAGGAGATGATGTTTTCAGCATGGTAGTGGAGCAAAATATAGATCTTTCTCTGGTTATGGGGCTTGTTGTAGCATACAATCTTATAAACTGTAAAATATAA 603 0.3781 MGKVRPQTLHSSATTCNFTCKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCKHRDEVHLMDQNGDILFTMLKKQYKLSRFWEGYRFPATRNDHKGPCFRVSKTYKISRGGSIYEVELGLDKNQPYIHKIESSTYNSACKISNEVGVVVAELRRKKSRCGVDLGDDVFSMVVEQNIDLSLVMGLVVAYNLINCKI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00340 200 PANTHER - 22 196 IPR007612 -
Lapu10g00340 200 Gene3D - 17 199 IPR038595 -
Lapu10g00340 200 SUPERFAMILY Tubby C-terminal domain-like 21 197 IPR025659 -
Lapu10g00340 200 Pfam LURP-one-related 21 191 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00340 Lapu-Chr10 5737254 5738373 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00340 - - gmx:100820270 373.629