Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00337 ATGGACCTCCCCAACCACAAATTCTTCCAATCTCCATCTGCATTGGCAGTGGCAGTGGCAGTGGCACCACATGGGGAAGCACTCACTGAGAGCAACATGAACATGTATGGGAAAAGCAAAGACAACCCTTTCGCAGATGACTTCCCTGATCCACTTTGCAAGCTCAACCTGAAGGAAACCTCCGAGTTTGTCAAGTCTTTGCCTGTGCCGAATGGCAGAGCCGAAAGCAGAGGCCACTCTGTTTCACAACAAAGGAGACTATTAGAGGCTCCCTCCACTCCTGGGAGACCAGTTTTCACCTTCAGCTCTGGCCTTCCAAGAAAGAGCTTCCCTTCCAAGTGGGATGATGCAGAGAAATGGCTCATGAGCACTTCTTGCCATGACTCACCTGCTCACAGCAACAACAACAACAACACTCACAAGGTTTCAGTCTCCGACTCCTCAAAGGTTGCAACCAGACAACAATGTGAAGATGTTGGCTTTAAGCAGCAAATGGAAAATTTCTCAGAGAAATCAAGGGTCACAGAAGAAAGGGTGTCCAAAGCTGTCCCGAACTTCCAGTGGTCTCCTTCTTTGGACCACCACCATAACGCACTGAGCGCTTTCCATGGTGTTAAAGACATTGTACTCAAAGATAAGTTCACGGACAGCATAGAGCCTATTTTGCCAAATTTGAGATATTTAGAGCCGGCTAAGGAAGGGTTCTTGTTTAGGAACCAAGGTGGTGGGGCAATGCAAGATGCTTGCACAGAAGTGGTTCAACATAGAGACATTGGGACTGAGATGACTCCTCTGGGAAGTTCCACCACTTCAAGATGCCACACCCCAGTTAAGATTTCATCACCTCCTCGCCACAACACTCCTGCAAGTAGATCAGGACCATTGGCCTTAGCTAGCAGTGCCTGCACTCTTGATGTCATTCAGCTGGAGGAGTGCCATTTTTCTAAACTGCAACTAGGAACACAGTATGATATAGTCACTTCAAATTGGAGCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGCTTGAGGCATAATGGTAGCCACAAAGCTGATTCAGACTGCATAGCTGCTTCATGGGAAGAAGAGGAGAAGACCAAGTGTTGTTTAAGGTACCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAGTGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAGATCAAACCTTGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAGGAGTGGAGAGCAGAAGCCAGACAGCAACACTTGGAGCAAATCCAGAAGGCCACTGAACAAGCTCAAAAGATGATTCATAAACATAACTCACACTTTTCAAAGCCAAGTTCATGTGGTTGTTTCCCTTGCAATAACAACCATCATTGA 1422 0.462 MDLPNHKFFQSPSALAVAVAVAPHGEALTESNMNMYGKSKDNPFADDFPDPLCKLNLKETSEFVKSLPVPNGRAESRGHSVSQQRRLLEAPSTPGRPVFTFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHSNNNNNTHKVSVSDSSKVATRQQCEDVGFKQQMENFSEKSRVTEERVSKAVPNFQWSPSLDHHHNALSAFHGVKDIVLKDKFTDSIEPILPNLRYLEPAKEGFLFRNQGGGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALASSACTLDVIQLEECHFSKLQLGTQYDIVTSNWSSSEEEEKEISKSLRHNGSHKADSDCIAASWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIQKATEQAQKMIHKHNSHFSKPSSCGCFPCNNNHH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00337 473 Coils Coil 388 415 - -
Lapu10g00337 473 PANTHER OS02G0116800 PROTEIN 78 466 - -
Lapu10g00337 473 MobiDBLite consensus disorder prediction 128 149 - -
Lapu10g00337 473 Coils Coil 432 452 - -
Lapu10g00337 473 MobiDBLite consensus disorder prediction 68 100 - -
Lapu10g00337 473 MobiDBLite consensus disorder prediction 261 292 - -
Lapu10g00337 473 CDD UDM1_RNF168_RNF169-like 392 449 - -
Lapu10g00337 473 Pfam Remorin, C-terminal region 358 454 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00337 Lapu-Chr10 5708029 5711851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00337 - - gmx:100819894 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00337 10 5708029 5711851 Lapu10g00337 10 5708029 5711851 ECH