Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00336 ATGCGGAAAACCGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTCCTTCTTCCTCGCCACCATCACAATCACCCTCCCTTTCCTTCTTCTTCCTCTCTCTCTTCCCGCTCTCTATTTTCTCCCTTTCGCTTCCTCTTCTCTACTCCTTTTTCTTCCATGGCTTCTGATTCCCCTTTCCCAGTCACTGCTCAAAACATCAACCCCAAGGTTCTGAAATGTGAGTACGCTGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAGGATTTACAGGCCAATCCCGGTTCTCATCCATTTGACGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCCTCCAATAACTTTTTTCCGAGAGGTTCTTGCATTATCTGATCATCCAGCTATATTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATGCAATAGAACGAGCTTGGCAAATTGTGGAACAGATTCCCGGCAGAGCAACTGGTGCCTATAGCCACAGTCAGGGTGTCAAGGGTTTGCGTGATACAATAGCTGCCGGAATTGAAGAGCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGTGCAAGTCCAGCAGTCCATAATATGATGCAATTACTCATCAGATCGGAAAATGATGGTATTCTGTGTCCCATTCCACAGTACCCTCTGTACTCAGCCTCAATTGCCCTCCATGGTGGCTTCCTGGTACCTTATTATTTAGATGAAGCAACCGGTTGGGGGTTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAACCCTGGCAATCCAACGGGGCAGGTTCTTTCCGAGGAAAATCAGCGTGATATAGTAGATTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTCCCTGAGAAGAAATTTCACTCATTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAACGACATCACCTTAGTATCCTTTCAATCAGTCTCCAAAGGTTACCATGGGGAGTGTGGGAAACGAGGAGGTTACATGGAAGTGACTGGCTTTTCTGCAGAAGTTAGGGAACAAATATATAAAGTGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGCCCACCTAAGGTTGGTGACGAGTCCTATGAATCATTCATGGCTGAGAAGGGAAATATTTTGGCATCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCTTTCAACAAACTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGCCTGTCCCAAAAGGCTATCAAAGCTGCAGGGGATGCAAATACTGCACCTGATAACTTCTATTGCAAGCGCTTGCTTAATGCCACAGGAGTAGTGGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGGTGCACCATTTTGCCTCCAGAAGAAAAGATTCCAGCCATTGTCTCCCGGTTGACAGAGTTCCATGAAAAGTTCATGGATGAGTTCCGTGACTAA 1623 0.4529 MRKTAADRFRHLFNRSLLLPRHHHNHPPFPSSSSLSSRSLFSPFRFLFSTPFSSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLQANPGSHPFDEILYCNIGNPQSLGQPPITFFREVLALSDHPAILDKSETQGLFSADAIERAWQIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIALHGGFLVPYYLDEATGWGLEIPELKKQLEAAKSKGINVRALVVINPGNPTGQVLSEENQRDIVDFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESFMAEKGNILASLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDANTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPPEEKIPAIVSRLTEFHEKFMDEFRD* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00336 540 FunFam alanine aminotransferase 1 403 540 - -
Lapu10g00336 540 Pfam Aminotransferase class I and II 165 522 IPR004839 GO:0009058|GO:0030170
Lapu10g00336 540 PANTHER ALANINE AMINOTRANSFERASE 55 539 IPR045088 GO:0008483
Lapu10g00336 540 CDD AAT_like 153 529 - -
Lapu10g00336 540 FunFam alanine aminotransferase 2 168 414 - -
Lapu10g00336 540 SUPERFAMILY PLP-dependent transferases 65 534 IPR015424 -
Lapu10g00336 540 Gene3D Aspartate Aminotransferase, domain 1 66 538 IPR015422 GO:0003824
Lapu10g00336 540 Gene3D - 168 414 IPR015421 GO:0003824
Lapu10g00336 540 Gene3D - 117 167 - -
Lapu10g00336 540 FunFam Alanine aminotransferase 2 117 167 - -
Lapu10g00336 540 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00336 Lapu-Chr10 5699659 5705830 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00336 K00814 - gmx:100127413 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00336 10 5699659 5705830 Lapu10g00336 10 5699659 5705830 ECH