Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00332 ATGGCGGAGAAATCATGCATCAAGCGCCTTCAGAAGGAATATAGAGCTCTCTGTAAAGAGCCCGTTTCTCATGTTGTAGCTCGTCCTTCACCGAGTGATATTCTTGAGTGGCATTATGTGTTGGAGGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTACTATGGAAAAATCAAATTTCCTCCTGAATATCCGTATAAACCTCCTGGAATTAGCATGACTACACCTAATGGACGGTTCATGACACAAAAAAAGATCTGTTTGTCTATGAGTGATTTTCATCCAGAAAGTTGGAATCCCATGTGGTCAGTATCAAGCATATTAACAGGGCTTCTTTCATTCATGATGGACAACAGTCCAACCACTGGCAGTGTAAACACAACCACAACTGAGAAGCAACGTCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAACGCAACATTCAGGAAGATGTTCCCTGAGTATGTGGAGAAGTACAACCAGCAACAACTTTCTGAACAGGCTGCTCAAGAGCGGGTCTCATCAGAGGCGTCTCCTGACAAGAGTTCAAAGTCTGTTTTGGAGAACAAATTAGAATCTACAGGAGAAGACATGAGAAGAGTTGATGGGTTGAAGGATATGAGAAAAAACAGAAAACCGTTTCCCACATGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTAATGGCGTTACCTCTGCTTCAGCTGTGA 717 0.424 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPSDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTTTEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQQQLSEQAAQERVSSEASPDKSSKSVLENKLESTGEDMRRVDGLKDMRKNRKPFPTWMMLLLFSIFGVVMALPLLQL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00332 238 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 158 - -
Lapu10g00332 238 SMART ubc_7 8 162 - -
Lapu10g00332 238 MobiDBLite consensus disorder prediction 167 195 - -
Lapu10g00332 238 SUPERFAMILY UBC-like 5 157 IPR016135 -
Lapu10g00332 238 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Lapu10g00332 238 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Lapu10g00332 238 CDD UBCc 7 117 IPR000608 -
Lapu10g00332 238 MobiDBLite consensus disorder prediction 167 183 - -
Lapu10g00332 238 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Lapu10g00332 238 Pfam Ubiquitin-conjugating enzyme 9 123 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00332 Lapu-Chr10 5654119 5659078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00332 1 238 Miscellaneous Gene Families AT1G17280 77.406 7.53e-138 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00332 K04554 - gmx:100778181 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00332 10 5654119 5659078 Lapu10g00332 10 5654119 5659078 ECH