Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00320 ATGATTTCAAGTAAAAGAAATGTGTTTGGCACCAAGGGTAGAACGGGTTTGGATTTCATGGTTTTGGTGTTAACAGTGTCATGGTTCTGTTGGACTGCTATATGTGTCTCAGCTACAGCACAAGCAGACCCCCCATCACCTCAACAGAACCAAAAGCTAAGGTTTGGCCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTACGCAAATGGCAAGACCACACCTTGCTTGGATGTGCTCCCTTCTCAGAATTTTTCTTGCTCTGACCTCAATACCACTGTCTTTATTAACAGAATGATCCAAGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATCTTTGGGTTTGATTGCTCGGATTCAGTTAAATCATTGGAGGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTGGGCAACCATGACCAGGAAGGAACCCTCTCTAGGGAAGGGGTGATGAAGCATATTGTTGGGATGAAAAACACCTTAGCTGAATTCAATCCTGCTGAAGTACATACCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCTCTGATTTTGAAAATAAATCAGTGCTCAACCTATATTTTCTTGATAGTGGAGATTATTCCAAAGTTTCTACAATTTCTGGTTATGATTGGATCAAGCCCTCTCAGCAACTTTGGTTCCAACGAACATCTGCAAAGCTTAAGAAAGCATACATAAGTGGACCAGTGCCTCAGAAAGATGCTGCTCCTGGTCTTGCATATTTCCACATCCCTCTACCAGAATACGCTAGTTTTGACTCATCAAACATGACAGGTGTGAAACTGGAACCGGATGGCAATGGCATTAGCTCTCCTTCTGTGAACTCTGGCTTCTTCACAACCTTGGTTTCAGCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGATCACCTCAATGACTTCTGTGGAAATCTTATGAATATTCACCTTTGTTATGCTGGGGGATTTGGATACCATGCTTATGGAAAGGCAGGGTGGTCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGGAGAAAACAGAAAAAGGAAATTGGGGAGATGTTAAGTCAATTAAAACATGGAAACGCCTTGATGATCTCCATCTTACTGGAATTGATGGCGAGGTCCTGTGGAGCAAGAGCTCTGGTGGTAAGATATACTGTGATACTTATAAGATTACTCATGTTCTACATAAACTGGCCACAGACTGA 1263 0.4268 MISSKRNVFGTKGRTGLDFMVLVLTVSWFCWTAICVSATAQADPPSPQQNQKLRFGQNGEFKILQVADMHYANGKTTPCLDVLPSQNFSCSDLNTTVFINRMIQAEKPNLIVFTGDNIFGFDCSDSVKSLEAAFAPAIASNIPWVAVLGNHDQEGTLSREGVMKHIVGMKNTLAEFNPAEVHTIDGFGNYNLEVGGVEGSDFENKSVLNLYFLDSGDYSKVSTISGYDWIKPSQQLWFQRTSAKLKKAYISGPVPQKDAAPGLAYFHIPLPEYASFDSSNMTGVKLEPDGNGISSPSVNSGFFTTLVSAGDVKAVFTGHDHLNDFCGNLMNIHLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGNWGDVKSIKTWKRLDDLHLTGIDGEVLWSKSSGGKIYCDTYKITHVLHKLATD* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00320 420 CDD MPP_Dcr2 59 346 - -
Lapu10g00320 420 SUPERFAMILY Metallo-dependent phosphatases 59 370 IPR029052 -
Lapu10g00320 420 PIRSF Ptase_At2g46880 11 395 IPR011230 -
Lapu10g00320 420 Gene3D - 60 371 IPR029052 -
Lapu10g00320 420 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 32 398 - -
Lapu10g00320 420 FunFam Probable inactive purple acid phosphatase 29 60 373 - -
Lapu10g00320 420 Pfam Calcineurin-like phosphoesterase 61 322 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00320 Lapu-Chr10 5548659 5552073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00320 - - gmx:100794167 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00320 10 5548659 5552073 Lapu10g00320 10 5548659 5552073 ECH