Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00318 ATGGGGGGAAAGAGGAGGAAGAACGACGATTCGGATGTGGAAGAATCAGAAACAGCGTCCTCGAAGAAGAAGACAATAACGGCGGAGAAGAAGGATCAGTTACGTCCTTCGATGATAAAGAACAAGGAGAAGAGATCGGAGGTGCACGCGAAGCTGAAGCACCAGAAGAAGCTCGATAAGCGTGCTAAGGCTAAGGCTCGTGATGCTGCTCTCAAAAGAGCTCTCGAGCTCGGTGAAGAGCTTCCGGAGAAGAAGGTCCCTCGCACAATTGAGAACACAAGGGAAATCGACGAGACCGTTTGCAAGCCAGACGACGAAGAGTTGTTTGCTGGAAATGATGCTGATGAATTCAGTTCAATTTTGCATCAGCAACAAACTCCCAAGATATTAATAACCACTTGCCGCTTCCATTCTACAAGGGGACCTGCTTTTATATCGGAGTTGCTATCTGTTATACCAAATGCTCATTACTTTAAGAGAGGAACATATGATCTAAAAAAGATTGTAGAATATGCAAAGAATAAGGACTTCACTTCTGTAATAGTTGTTCACACCAATAGAAGGGAACCGGATGCTCTTTTAATAATTGGTGTACCTAATGGGCCCACTGCTCATTTCAAGCTGTCGAAGCTTGTTTTGCGCAAGGATATCAAGCATCATGGAAATCCAACCAGTCACAAGCCTGAGCTTGTACTGAATAACTTCACAACACGACTAGGGTCTCGAATTGGAAGGTTGATACAGTCACTTTTTCCACAAGATCCAGAATTTAATGGTCGACGAGTAGTGACCTTCCACAACCAAAGAGATTTCGTTTTCTTCCGGCATCATCGGTACATTTTTGAAAACAAAGAAGTTAAAAAAGCTGAGTCGAAAGGTAAAAAGGACAAAGATGGTAAGAGCGAGAATGTTCCTGAACAGAAAACAATTGCTCGGCTTCAGGAATGTGGCCCCCGTTTCACATTGAAGTTGATTAGCCTGCAGAATGGAACATTTGACACAAAGGGTGGGGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGAAGGTTTTTCCTATGA 1071 0.4379 MGGKRRKNDDSDVEESETASSKKKTITAEKKDQLRPSMIKNKEKRSEVHAKLKHQKKLDKRAKAKARDAALKRALELGEELPEKKVPRTIENTREIDETVCKPDDEELFAGNDADEFSSILHQQQTPKILITTCRFHSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKNKDFTSVIVVHTNRREPDALLIIGVPNGPTAHFKLSKLVLRKDIKHHGNPTSHKPELVLNNFTTRLGSRIGRLIQSLFPQDPEFNGRRVVTFHNQRDFVFFRHHRYIFENKEVKKAESKGKKDKDGKSENVPEQKTIARLQECGPRFTLKLISLQNGTFDTKGGEYEWVHKPEMDTSRRRFFL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00318 356 ProSiteProfiles Brix domain profile. 127 333 IPR007109 GO:0006364|GO:0019843
Lapu10g00318 356 SMART Brix_2 130 327 IPR007109 GO:0006364|GO:0019843
Lapu10g00318 356 MobiDBLite consensus disorder prediction 1 65 - -
Lapu10g00318 356 Pfam Brix domain 142 325 IPR007109 GO:0006364|GO:0019843
Lapu10g00318 356 FunFam Ribosome production factor 1 127 323 - -
Lapu10g00318 356 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 36 356 IPR044281 GO:0006364|GO:0042134
Lapu10g00318 356 MobiDBLite consensus disorder prediction 1 48 - -
Lapu10g00318 356 MobiDBLite consensus disorder prediction 286 305 - -
Lapu10g00318 356 SUPERFAMILY Class II aaRS ABD-related 127 330 - -
Lapu10g00318 356 MobiDBLite consensus disorder prediction 286 309 - -
Lapu10g00318 356 Gene3D - 127 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00318 K14846 - gmx:100791194 595.89