Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00307 ATGAGTGGTGAAGAAGTTCCTGAAAATCGTCCAACTCCTCGCTTAAATGAAAGGATTCTTTCATCTTTGTCTAGGAGATCAGTTGCAGCTCACCCTTGGCATGATCTAGAAATTGGACCTGGGGCGCCTATGATTTTCAACTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTCAAATACGAACTTGACAAAAAGACTGGATTGATTAAAGTTGATCGAATATTGTACTCATCGGTTGTTTATCCTCATAACTACGGTTTCATCCCAAGAACTCTATGTGAAGACAATGATCCAATGGATGTCTTGGTTCTCATGCAGGAGCCAATTCTTCCTGGTTGTTTCCTAAGAGCCAGGGCAATTGGACTCATGCCTATGATTGATCAGGGGGAGAAGGATGATAAAATTATTGCAGTATGTGCTGATGATCCTGAGTATAAGCACTACACTGACTTCAAAGAACTTCCACCTCATCGCCTCACAGAGATTCGACGCTTCTTTGAAGATTGTATCTTCTGTGTTTCCTTCATAAATCTTTGA 537 0.4134 MSGEEVPENRPTPRLNERILSSLSRRSVAAHPWHDLEIGPGAPMIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPILPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELPPHRLTEIRRFFEDCIFCVSFINL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00307 178 ProSitePatterns Inorganic pyrophosphatase signature. 95 101 - -
Lapu10g00307 178 FunFam Soluble inorganic pyrophosphatase 4 27 171 - -
Lapu10g00307 178 SUPERFAMILY Inorganic pyrophosphatase 25 168 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lapu10g00307 178 CDD pyrophosphatase 44 168 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lapu10g00307 178 Pfam Inorganic pyrophosphatase 48 168 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lapu10g00307 178 Gene3D Inorganic pyrophosphatase 27 170 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lapu10g00307 178 PANTHER INORGANIC PYROPHOSPHATASE 10 168 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00307 Lapu-Chr10 5424055 5426666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00307 K01507 - gmx:100500365 332.413