Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00280 ATGCAGCAGACACCGCCAATGATTCCTATGATGCCTTCCTTCCCACCTACTAACATAACTACTGAGCAGATTCAAAAGTACCTTGATGAGAACAAGAAGCTGATTCTGGCGATATTGGACAATCAAAATCTTGGGAAACTTGCAGAATGTGCCCAGTACCAAGCCCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAAACCCCAGCCATGCCTCCACAGATGGCGCCACACCCTGCCATGCAACCAGGGTTCTATATGCAACATCCTCAGGCAGCAGCAGCAATGGCTCAGCAGCAAGGAATGTTCCCCCAGAAAATGCCATTACAATTTGGTAATCCACATCAAATTCAGGATCAACAACAGCAGCTACATCAGCAGGCTATCCAAGGTCAAATGGGACTGAGACCTGGAGGGATAAATAATGGCATGCATCCAATGCACAGTGAGGCTGCTCTTGGAGGTGGCAACAGCGGTGGTCCACCTTCAGGTACTGGTCCAAATGATGCGCGTGGTGGAAGCAAGCAAGACGCATCTGAGGCTGGGACAGCTGGCGGAGATGGACAAGGTGGATCTGCTGCTGCACACAACAGTGGAGATGGTGAATCTTCTTATCTGAAGGGGTCAGAAGCGGCAAAGTGA 660 0.4955 MQQTPPMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMAPHPAMQPGFYMQHPQAAAAMAQQQGMFPQKMPLQFGNPHQIQDQQQQLHQQAIQGQMGLRPGGINNGMHPMHSEAALGGGNSGGPPSGTGPNDARGGSKQDASEAGTAGGDGQGGSAAAHNSGDGESSYLKGSEAAK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00280 219 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Lapu10g00280 219 MobiDBLite consensus disorder prediction 122 136 - -
Lapu10g00280 219 MobiDBLite consensus disorder prediction 122 219 - -
Lapu10g00280 219 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 216 IPR044779 GO:0003713
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00280 Lapu-Chr10 5024270 5028822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00280 - - vun:114167142 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00280 10 5024270 5028822 Lapu10g00280 10 5024270 5028822 ECH