Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00262 ATGGAAAGCAAGGAGCACAGCATGAAGCAAAGCAGCATGGAGACAGAGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTTTCAGAACTGTGTGGGGGTTTCAAGCTTCTGTCAGACCCTGAAACAGGTTTGATAACAAGTGAGAGTCTGAGGACAAACTCAGCTCTTCTTGGCATGGAGGGCATGAGCATGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGGGATGGAAAGCTTAATCAAACTGAATTTTGCATCCTCATGGTCAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAAAAGGCAATTGATGAAGAACTTAGCAAGTCCCCATCTTAG 381 0.4698 MESKEHSMKQSSMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSMEDADAMVRQGDLDGDGKLNQTEFCILMVRLSPGMMEDAESWLEKAIDEELSKSPS* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00262 126 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
Lapu10g00262 126 SUPERFAMILY EF-hand 22 121 IPR011992 -
Lapu10g00262 126 Gene3D - 14 125 - -
Lapu10g00262 126 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Lapu10g00262 126 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Lapu10g00262 126 PANTHER CALCIUM-BINDING PROTEIN KIC 14 123 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00262 Lapu-Chr10 4757336 4757992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00262 1 121 EF-hand Containing Proteins AT2G46600 69.841 8.16e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00262 K24345 - gmx:100801586 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00262 10 4757336 4757992 Lapu10g00262 10 4757336 4757992 ECH