Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00255 ATGGCCAACTTATTCACCTTGTTTATGCTGTGGTTGTGTATGCTATCTTCTATCTACAATGTGAAGCTTATAGCACACGGAAGTATTAAGGAAGGATCAACCAGGTTCTATGATTTCAAGGTTCAAACCAAAAGAGATACCAAACTTTGCAACTCTAAAGACATTGTCACAATTAATGGTATGTTTCCAGGACCTGTTGTTTACGCCCAAGAGGATGATAGAATAATAGTAAAAGTGACCAACAAGACACCTTTCAATGTTACAATTCACTGGCATGGTGTTCGGCAAAGGCTATCATGCTGGTATGATGGGCCATCCTTGATTACACAATGTCCAATTCGATCAGGCCAGAGTTTCACCTATAATTTCTCAGTGGTGGAGCAGAAGGGCACCTTCTTCTGGCATGCTCACGTTTCTTGGTTAAGAGGAACAGTTCATGGTGCCATGATTGTTTATCCAAAGGCCGGGGTACCTTACCCATTTAAGTTTCCCTATCAAGAGCACATAATTATACTAGGGGAGTATTGGCTGCAGGATCTCCAACAAATTGAGAATGCCACTCTAGCAAGTGGAGGACCTCCTCCAAAAGCAGATGCATATACCATTAACGGTCATCCAGGACCCAACTACAACTGCTCCACTAATGATGTCTACGAAATTGATGTGATCCCGGGGAAGACCTATTTGTTAAGATTGATTAATGCAGGTTTGAACACTGAGAATTTTTTTGCCATTGCTAATCACAATTTAACAATCGTGGAAGCTGATGCAGAATACACAAAGCCATTCACCACAGACACAGTGATGATTGGACCAGGTCAAACACTGGGTGTCCTTGTCTCTGCAAATCAACCAGTAGGAAAATACTCCATGGCTGTAGCACCTTATGAGTCCGGAAAGATTGTCATATATCAAAACGTTTCAGCTATAGCTGGCTTCAACTACGTAGGAGCTCCATCTGATAGCCTTTCTTTACCAGCTAAATTGCCTACACTTGATGATGAAGTGGCTGTTAAAACAGTCATGGACGGATTACGGAGCCTAAATCAAGTCAATGTTTTCAAAGAAATTGATAAAAATCTATTCATTACCATTGGATTGAATGTTCAAAAGTGTCACTCAAAGACACCAAAGCAAAACTGCCAAGGCATGAACAATGGGGTGCTGGCAGCTTCAATGAACAATATAAGTTTCGTTGATCCCAATATTTCAATCTTGGAAGCATATTATAAGAAAATAAAAGGAACATATACTGAAGATTTCCCAGACACTCCCCCAAAGTTCTATGACTTTGTTAATGGTGCCCCTAATAGCATTCCATATGACACGCAGTCATTGAATGGTACTAGAATAAAGGTCCTTAAATATGGTAGCAGAGTGCAACTCATTCTGCAGGACACAGGGATAGTCAACACTGAAAACCACCCAATGCACTTCCACGGCCACAGCTTTTATGTGGTAGGGTATGGCACAGGCAACTATAACCCAGTAACTGCACAATTTAATTTAGTGGATCCTCCATACCTAAACACGATTGGAGTTCCAACAGGAGGATGGGCAGCAATTCGCTTTGTAGCTGATAATCCAGGGGTGTGGTTTCTGCACTGCCACATTGATATACACAAGTCATGGGGACTGGGAATGGTATTTATTGTGAACAATGGAAAAGGAGAGCTGGAATCCTTACCAAATCCTCCACCAGACTTGCCACAGTGTTAA 1719 0.4159 MANLFTLFMLWLCMLSSIYNVKLIAHGSIKEGSTRFYDFKVQTKRDTKLCNSKDIVTINGMFPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGVRQRLSCWYDGPSLITQCPIRSGQSFTYNFSVVEQKGTFFWHAHVSWLRGTVHGAMIVYPKAGVPYPFKFPYQEHIIILGEYWLQDLQQIENATLASGGPPPKADAYTINGHPGPNYNCSTNDVYEIDVIPGKTYLLRLINAGLNTENFFAIANHNLTIVEADAEYTKPFTTDTVMIGPGQTLGVLVSANQPVGKYSMAVAPYESGKIVIYQNVSAIAGFNYVGAPSDSLSLPAKLPTLDDEVAVKTVMDGLRSLNQVNVFKEIDKNLFITIGLNVQKCHSKTPKQNCQGMNNGVLAASMNNISFVDPNISILEAYYKKIKGTYTEDFPDTPPKFYDFVNGAPNSIPYDTQSLNGTRIKVLKYGSRVQLILQDTGIVNTENHPMHFHGHSFYVVGYGTGNYNPVTAQFNLVDPPYLNTIGVPTGGWAAIRFVADNPGVWFLHCHIDIHKSWGLGMVFIVNNGKGELESLPNPPPDLPQC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00255 572 Pfam Multicopper oxidase 167 317 IPR001117 -
Lapu10g00255 572 SUPERFAMILY Cupredoxins 164 346 IPR008972 -
Lapu10g00255 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Lapu10g00255 572 Gene3D - 370 572 IPR008972 -
Lapu10g00255 572 NCBIfam laccase 33 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lapu10g00255 572 Pfam Multicopper oxidase 422 555 IPR011706 GO:0005507|GO:0016491
Lapu10g00255 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Lapu10g00255 572 PANTHER MULTI-COPPER OXIDASE 38 557 IPR045087 -
Lapu10g00255 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Lapu10g00255 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Lapu10g00255 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Lapu10g00255 572 Gene3D - 163 350 IPR008972 -
Lapu10g00255 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Lapu10g00255 572 SUPERFAMILY Cupredoxins 32 176 IPR008972 -
Lapu10g00255 572 Gene3D - 13 153 IPR008972 -
Lapu10g00255 572 SUPERFAMILY Cupredoxins 355 572 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00255 Lapu-Chr10 4663404 4666257 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00255 K05909 - gmx:100803876 1083.17