Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00246 ATGCACCAGCCAAGGAAGAAATTTACTGATTTTGCTGCTGTTAGGCAGGAGATCGCTGACGAGACCGACAGAGAAACAGGACGCAACAAGGGTATTTCATCCGTGCCCATCCATCTCAGTATCTACTCCCCACATGTTGTGAATCTGACGCTGGTTGATCTTCCGGGACTCACTAAAGTCGCTGTTGAGGGTCAACCAGATAGCATTGTGCAAGACATCGAAAATATGGTTCGGGCCTTTATTGAAAAGCCGAATTGCATCATTTTGGCAATATCTCCTGCCAATCAAGACCTTGCAACCTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCTAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCGTCTGAGATCCTTGAAGGGAAATCATATAAGCTAAATTTCCCTTGGATTGGTGTTGTTAACCGCTCCCAAGCTGATATCAATAAACAAGTTGATATGATTGCTGCTCGAAAAAGAGAAACCGAGTATTTTGCTAATACCCCAGAATATAGACATCTTGCTTCCAGAATGGGCTCTGTGCATCTAGGAAAGGTGCTATCCAAGCATTTGGAAACTGTCATCAAGTCTCGGATCCCAGGCCTACAATCAATGATTAACAAGACTATCATTGACTTGGAGACAGAACTGAACCGTATTGGGAAACCTATTGCTGCTGATACTGGAGGGAAGTTATACACGATAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATACGGCCAGGTGGTGAAAAAATTTACCAAGTATTTGATAATCAATTTCCAGCATCTTTAAAACGGCTGCAGTTTGACAAACATTTATCAATGGACAATGTGCGGAAACTAATAACTGAAGCAGATGGTTATCAACCACATCTCATAGCTCCTGAGCAAGGATACCGACGCCTTATCGAATCTTGCTTGGTATCAATTAGGGGCCCCGCTGAAGCGGCTGTTGATGCGGTTCACGGAATTTTGAAGGATTTGATTCAGAAATCTATGAGTGAGACAATGGAATTAAAGCAGTATCCCACCTTGAAGGTAGAACTCGGAAGTGCAGCTGTTGATTCGTTAGAGAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCTTTTGGTGGACATGGAGTATGGCTATTTGACTGTCGAATTTTTCCGCAAACTTCCCCAAGACGCAGAAAAGGGTGGAAATCCTACTCATTCACTTTTCGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACTGTCTTGTCCTATGTGAACATGGTATGTGGGACCCTGAGGAATACCATTCCCAAGTCCGTAGTTTATTGTCAAGTGCGTGAGGCTAAGCGCAGCTTACTGGATCACTTCTTTACAGAATTGGGGAAAAAGGAGGGAAAACAACTAGCTTCACTTCTAAACGAGGACCCAGCAATCATGCAGCGCCGTACGTCCCTTGCAAAGAGGCTAGAGCTATACAGAAGTGCCCAGACAGAAATTGAGGCAGTTGCATGGGAAAGGTAG 1566 0.433 MHQPRKKFTDFAAVRQEIADETDRETGRNKGISSVPIHLSIYSPHVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDASEILEGKSYKLNFPWIGVVNRSQADINKQVDMIAARKRETEYFANTPEYRHLASRMGSVHLGKVLSKHLETVIKSRIPGLQSMINKTIIDLETELNRIGKPIAADTGGKLYTIMEICRTFDQIFKDHLDGIRPGGEKIYQVFDNQFPASLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAVHGILKDLIQKSMSETMELKQYPTLKVELGSAAVDSLERMREESKKATLLLVDMEYGYLTVEFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGTLRNTIPKSVVYCQVREAKRSLLDHFFTELGKKEGKQLASLLNEDPAIMQRRTSLAKRLELYRSAQTEIEAVAWER* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00246 521 CDD DLP_1 1 211 IPR001401 GO:0003924|GO:0005525
Lapu10g00246 521 Pfam Dynamin central region 132 399 IPR000375 -
Lapu10g00246 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 220 IPR027417 -
Lapu10g00246 521 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 211 IPR030381 GO:0005525
Lapu10g00246 521 Gene3D - 1 220 IPR027417 -
Lapu10g00246 521 Gene3D Dynamin, middle domain 242 497 - -
Lapu10g00246 521 FunFam Dynamin-related protein 5A 243 497 - -
Lapu10g00246 521 PANTHER DYNAMIN 2 517 IPR022812 -
Lapu10g00246 521 PRINTS Dynamin signature 93 111 IPR022812 -
Lapu10g00246 521 PRINTS Dynamin signature 135 154 IPR022812 -
Lapu10g00246 521 PRINTS Dynamin signature 43 60 IPR022812 -
Lapu10g00246 521 PRINTS Dynamin signature 112 128 IPR022812 -
Lapu10g00246 521 SMART dynamin_3 1 162 IPR001401 GO:0003924|GO:0005525
Lapu10g00246 521 Pfam Dynamin GTPase effector domain 425 517 IPR003130 GO:0003924|GO:0005525
Lapu10g00246 521 ProSiteProfiles GED domain profile. 429 521 IPR020850 -
Lapu10g00246 521 SMART GED_2 424 517 IPR003130 GO:0003924|GO:0005525
Lapu10g00246 521 Pfam Dynamin family 4 124 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00246 Lapu-Chr10 4494552 4500164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00246 - - gmx:100793097 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00246 10 4494552 4500164 Lapu10g00246 10 4494552 4500164 ECH