Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00243 ATGGCACCAAGAAACAGTCGCGGAAAGGCCAAGGGTGAGAAGAAAAAGAAGGAAGAAAAGGTTCTCCCGGTTGTCATAGACATCACAGTGAAGCTTCTCGATGAAACTCATGTTCTCAAGGGAATATCAACAGACAGAATAATAGACGTTCGTCGGCTTTTATCAGTGAATACGGACACATGTTATGTCACAAATTTTTCCCTGTCACATGAGGTAAGAGGGCCACGTCTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCCTGCCTCCTCACTTTAGTTGAAGAGGAATACAATGAAGAACGAGCAGTGGAGCACGTGCGAAGACTCCTCGACATCGTCGCCTGCACCACGAGCTTCGGTCCGTCGCCGCCTCCACCGCCGAAGAACACGGCCGGCACAGTCGCGAAGTCCGGCAAGTCCGAGGTCCCGCCGGCGAAAGATGCGGCGGTGACGGTTGCGGACGTGGACGGCGATATAAGCCACTCGTGCCCTAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTCTCGCACCTCACCGCACCTATACAATATGTGAAGAAAGGTTCGAGGCGGCGCGTGGAGGAGATATCGGAGGCGGATTATCTATTCTCACTGGATGTTAAGGTGTGCAACGGGAAAGTGGTACACGTTGAGGCTTGCAGAAAGGGGTTTTACAGCGTTGGGAAGCAGCGGATTCTGTGCCATAATCTTGTTGATTTGTTGAGACAGCTTAGCAGAGCTTTCGATCATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCTGCACAGTCACCCTCATCTTTTCCTCCTCTTCCTGTAGAGGATGAAACATGGGGAGGGAATGGTGGTAGTCTTGGAAGTGAAGGAAAGTATGATTTGATTCCTTGGGCTAAAGAGTTTTCATTTATTGCGTCTATGCCTTGCAAGACAGCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTACTGCATAGCCTGTTTGTTGATGTTTCTATTTTCAGAGCAATAAGGGCTGTTAAACATGTTATGGACGAGCCCAGTTTTAGTTCCTCAGTTGTAGAAAATAATATTATTTACACTGAGAGAGTAGGTGACATGAGTATCAAGGTCTCTAAAAATGGTTCTGTTGCAAGCTGTAAGATTGACACTAAAATTGACGGAGTTGAAGCTACTGGAGTAAATCATAAGGATCTAATAGAACGAAATCTACTGAAAGGAATCACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTCATTAATGTAAGATACTGTGGTTATGTGGTCGTTGTGAAAGTTGAGGGTGGAGTTAGTGAAAATGTTGACTCTCAATCTCAACAAATTATCGAATTGTTTGATCAACCAGAAGGTGGTGCCAACGCACTCAACATTAACAGTCTGAGATTACTTCTTCACAACACAACTCCACCAGAAAACAATAAACCAATGATTCAGATACAAACATTTGAGAGTGAGGAGCCTGGTGCTTCCAATTCTTTTGTGGAGAAGCTGATTAAAGAAAGTCTTGCTAAGCTTGAGGAAGAAGAACCTGGTATGGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGATGCAACATTTGCAAGACCAAAATAATAATACAGAAAAAGATAAGAAACCATCCTTGGAGAAGGCTAAGAATGATATGAAGGTCGAGGGTCTTGGGAAACCCCTTAAAGCCCTAAAGAACTATAAAAAGAAATCTGATTCAAACAATACCACTTCTGCATCTGAATATCCAAAATTTAATCGGGAGAATGAAAGCCGTCCATTGCCCTCAATTGAATCCCAACATGAAACTACAGAAGCTGAGAATGAGCTCGTTCTGAAAAGGATGTTATCTGAAGAAGCTTTTATCCGATTTAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATGCATGAGTTGATTGACTTATCTCGAAAATATTACACAGACGTTGCTCTCCCAAAATTGGTAGCAGATTTTGGCTCATTAGAACTTTCACCAGTTGATGGCCGCACTCTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGTTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTTTCACATGTGCAGTCACTTTGTATTCATGAGATGATAGTTCGAGCTTTTAAGCATGTCCTGCGGGCAGTAATTTCTTCTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGATGCTTTGAATTTGCTACTTGGTGTTCCTGGAAAAAGAGATTCAGATAAATCACATGAAGTTCATCCCTTGGTGTGGAAATGGCTAGAGGTGTTTTTGAAAAAGCGATTTGATTGGGATCTTCATAGGCTGAATTATAAAGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCTCCAATTCCCTTCCACAAATCTGATATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCTGCATGCTCATCTGCTGATGGAAGGCAGCTCCTAGAGTCATCCAAAACTGCTTTAGACAAGGGAAAGCTGGAGGACGCTGTTACTTATGGCACAAAGGCTCTTGCTAAGCTAGTAGCAGTTTGCGGTCCCTACCATCGAATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTGTATCATACTGGAGACTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGTTATGGGGATCTTGCTGTTTTTTATTACAGACTACAACACACAGAGCTGGCTCTGAAGTACGTGAAGCGTGCTTTATATCTTCTGCATCTAACATGTGGGCCATCTCATCCTAACACTGCTGCTACCTACATTAACGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTCGCACTCAGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGATTACTAGGCGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCGTTGAGCGTGCAGCATGAGCAAACAACTTTGCAAATTCTGAGAGCAAAACTTGGTCCTGATGACTTGCGAACACAGGATGCTGCCGCTTGGCTGGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTGAGTGTGTCAGATTTGCTGGACTATATTAATCCTAATCATGATACTAAAGGGAGAGATGCAGCAACAAAGAGAAGAAGTCAAATAACAAAGATGAGAGCGACATCGTACCTTAACCTTGGCCTGTCAAGTTCTGATGAGTCTTCTAAAGAAATTCCAAAAGAGGCTTCAGATGAAGAGGTACAAATACCTGTAGCAGAAGGTAGTGCAGATTCTGAGCAGGAAAGCAACTCTGGACCTGACTCAGAACATACTATTTTAAAACAAATATCAGATGAAAGACCACAAATTTATGATGAAATCTTGTCCGAAGCACATGCTGAAGGAGAGGATGGATGGCAACCTGTTCAAAGACCAAGATCAACTGGCTCATATGGCCGGAGACTGAAGCAGAGACGGGCAACACTTGGCAAAGTTTATAGTTATCAAAAGAATGTGGAAGTTGGCACAGAATCTCCTTTTGTAAGGAATGCTAGTCCGAGTAGCAGGTATTATTTCTTGAAGAAGCGGACAATTTCCCATGGGGGTTATACAGAAGATCATACAGTAAACATCACCCAAGGCCCTAAATTTGGAAGGAAAGTAGTTAAAGCTGTTACATACAGGGTCAAATCCACACCCTCAACTTCCAAGACTCGTGCAAATGAGTCGTTAGAGACTGGTGACAAGCTGTTTAGTTCTCTTTCAGAACCAGACCCACTTGATGTTAATCCAGTTAAGAATTCTCTAGTTAGTCTGGGAAAGTCTCCTTCATACAAGGAAGTGGCATTAGCTCCTCCAGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCCAAGTGAGATTTCTGTTAGCTGTGAACATGATGGTGGCAAACCTAAAGAGGAAGATATTGAAGGTGATAGGAATGTTAATGCTAATCCAACCCCGGCAGAGGCAAATGATATGGATAAAGAGAAGAATAATAGTTCTTTTTCAGATTCTGTTGATGATTCAGAGGATGATACTGGAGTTACTACTGAGGGGAAAGAGGAAACTCAGTTGAATGTTGCTGTGCAAGATAATTGTATGAGTGCTGAGGGGAAATTAGGAGATGTTGAAGCTCAAGGAGCAATCGATGATAGCATATTGATTCAGACAGTAGATGATCACGTGGATTCTTCCCAAATAGAACTCGATGCAAGTAATTCATCTGGCAGTTTGGAACCTAGTAATAATACAAATCCCATTTCCCAAGGTGGTGAGGATTTAAGGGTCAATGTGTCATCATCAAATCAGAGTCACACTGGGGGCATCCCATATAAGAAATTGTCCGCATCTGCAGCTCCATTCAACCCATCGCCTGCCATTGCACGTGCTCCACCAATTGCCATGAGTATGACTCTTCCTTCTGGTCCTAGTGCAGTTCCTGCAATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCCACCACTGTACTACCCGCGGTTAACCCAATGTGCTCCTCTCCTCACCATGCATATCCATCACCTCCAACTACACCAAACATGATGCAACCAATGCCATTTATATATCCTCCTTACACTCAACCTCAATCAGTACCACCTAGCAACTTTCCAGTCACTAGCAGTGCCTTTCATGCCAATCATTTTACATGGCAATGTAATCTGAACCCCACGGTATCTAAGTTTGGTCCCGGTGCTGTTTGGCCTGGTTGTCATCCTGTGGAATTTCCTCTTCCGTTACCTATTGTTGAACGAATCCCTGATCCCATTTCAGAGTCACAGGTTCTGTGCCATGGTTCTGAAAGTCCAAGTTCAGCTTCGATTCTTCCTGAGGACATTGATAATATTGGTGATTCTAATCAATTGGTAAAAACTTTAGTATCAGACACAAGTGAAGATGAAGCAGTAAGAGCTGGTTCAGAAATCCTGAAAGAAAATGGTGATATGAATTTACATGGGACTGAAAATTCTGGGAACAAGCCAAATCAACACGTTGGCTCAAATGACAACTCTAGCAGTAGTGAAACAAACATGGATGGTGAGAAAACCTTCAGCATTTTGATTCGGGGGAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCTAATGGCTCACAGTCATTTAAGGTTATTTATAACCGTGTAGTTAGGGGAAGTCATGCTTCCAAGCCTATCAATCTCTCGTCTAGTAAAGATTGTACTGCTACTGCTTAA 5541 0.4304 MAPRNSRGKAKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTDTCYVTNFSLSHEVRGPRLKDTVDVSALKPCLLTLVEEEYNEERAVEHVRRLLDIVACTTSFGPSPPPPPKNTAGTVAKSGKSEVPPAKDAAVTVADVDGDISHSCPKLENFYEFFSLSHLTAPIQYVKKGSRRRVEEISEADYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDHAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSSFPPLPVEDETWGGNGGSLGSEGKYDLIPWAKEFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVSIFRAIRAVKHVMDEPSFSSSVVENNIIYTERVGDMSIKVSKNGSVASCKIDTKIDGVEATGVNHKDLIERNLLKGITADENTAAHDITTLGVINVRYCGYVVVVKVEGGVSENVDSQSQQIIELFDQPEGGANALNINSLRLLLHNTTPPENNKPMIQIQTFESEEPGASNSFVEKLIKESLAKLEEEEPGMDYFVRWELGACWMQHLQDQNNNTEKDKKPSLEKAKNDMKVEGLGKPLKALKNYKKKSDSNNTTSASEYPKFNRENESRPLPSIESQHETTEAENELVLKRMLSEEAFIRFKESGTGLHCKSMHELIDLSRKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHVLRAVISSVDKEKMASSIADALNLLLGVPGKRDSDKSHEVHPLVWKWLEVFLKKRFDWDLHRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPIPFHKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDAATKRRSQITKMRATSYLNLGLSSSDESSKEIPKEASDEEVQIPVAEGSADSEQESNSGPDSEHTILKQISDERPQIYDEILSEAHAEGEDGWQPVQRPRSTGSYGRRLKQRRATLGKVYSYQKNVEVGTESPFVRNASPSSRYYFLKKRTISHGGYTEDHTVNITQGPKFGRKVVKAVTYRVKSTPSTSKTRANESLETGDKLFSSLSEPDPLDVNPVKNSLVSLGKSPSYKEVALAPPGTISKLQVYNPPSEISVSCEHDGGKPKEEDIEGDRNVNANPTPAEANDMDKEKNNSSFSDSVDDSEDDTGVTTEGKEETQLNVAVQDNCMSAEGKLGDVEAQGAIDDSILIQTVDDHVDSSQIELDASNSSGSLEPSNNTNPISQGGEDLRVNVSSSNQSHTGGIPYKKLSASAAPFNPSPAIARAPPIAMSMTLPSGPSAVPAIGPWPVNMNVHPGPTTVLPAVNPMCSSPHHAYPSPPTTPNMMQPMPFIYPPYTQPQSVPPSNFPVTSSAFHANHFTWQCNLNPTVSKFGPGAVWPGCHPVEFPLPLPIVERIPDPISESQVLCHGSESPSSASILPEDIDNIGDSNQLVKTLVSDTSEDEAVRAGSEILKENGDMNLHGTENSGNKPNQHVGSNDNSSSSETNMDGEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHASKPINLSSSKDCTATA* 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00243 1846 SMART tpr_5 993 1026 IPR019734 GO:0005515
Lapu10g00243 1846 SMART tpr_5 951 984 IPR019734 GO:0005515
Lapu10g00243 1846 SMART tpr_5 909 942 IPR019734 GO:0005515
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1393 1408 - -
Lapu10g00243 1846 SUPERFAMILY TPR-like 946 1073 IPR011990 GO:0005515
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1218 1241 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 603 617 - -
Lapu10g00243 1846 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1450 IPR027523 GO:0006996
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 566 639 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 121 143 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1419 1433 - -
Lapu10g00243 1846 Pfam Tetratricopeptide repeat 992 1066 - -
Lapu10g00243 1846 Pfam Tetratricopeptide repeat 908 978 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1387 1458 - -
Lapu10g00243 1846 ProSiteProfiles Clueless (Clu) domain profile. 297 574 IPR025697 -
Lapu10g00243 1846 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 864 1114 - -
Lapu10g00243 1846 Pfam Translation initiation factor eIF3 subunit 135 697 838 IPR033646 -
Lapu10g00243 1846 SUPERFAMILY Hypothetical protein c14orf129, hspc210 184 265 IPR023231 -
Lapu10g00243 1846 CDD CLU-central 699 839 IPR033646 -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1698 1712 - -
Lapu10g00243 1846 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Lapu10g00243 1846 Gene3D Tetratricopeptide repeat domain 980 1129 IPR011990 GO:0005515
Lapu10g00243 1846 Gene3D Tetratricopeptide repeat domain 868 979 IPR011990 GO:0005515
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1153 1175 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1500 1534 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 567 591 - -
Lapu10g00243 1846 ProSiteProfiles TPR repeat profile. 909 942 IPR019734 GO:0005515
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1747 1783 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1697 1717 - -
Lapu10g00243 1846 MobiDBLite consensus disorder prediction 1753 1783 - -
Lapu10g00243 1846 SUPERFAMILY TPR-like 875 980 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00243 Lapu-Chr10 4466434 4489061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00243 K03255 - gmx:100808136 3151.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00243 10 4466434 4489061 Lapu10g00243 10 4466434 4489061 ECH
Lapu6g01507 6 14845473 14847182 Lapu10g00243 10 4466434 4489061 PCT