Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00233 ATGGGAGAACATGAAGGGTGGGCACAGCCACCAAGTGGGCTATTGCCAAATGGTTTGTTGCCCAATGAAGCTGCCTCCGTGATACAGGTGCTTGATTCAGAGCGGTGGTTGAAAGCCGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCACCATCTGAGGAACGCCGGAATGCGGTTGCTGACTATGTCCAACGGCTGATCATGAAGTGCTTCCCTTGCCTGGTGTTCACCTTTGGGTCGGTACCACTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACGGCATTCAGTGAGAATCAAAATCTGAAGGAGACATGGGCACATCAGGTTCGTGACATGCTGGAGAAAGAGGAGAAGAATGATAATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCCGAAGTGAAAATTATAAAGTGTCTCGTTGAGAATATTGTAGTCGACATTTCATTTAACCAGCTTGGAGGTTTGTGTACCCTTTGTTTTCTTGATGAGGTTGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGTATTATCCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTCGGTGCTCACCATGGACTCATCTCAACTTATGCCTTAGAGACCTTGGTTCTTTACATTTTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTGTTGTATCGATTTTTGGAATTCTTTAGTAAGTTTGACTGGGATAATTTTTGTGTAAGTCTATGGGGTCCAGTACCTATTAGTTCGCTCCCGGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTCAATGCCTGTAGCGCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCATTTCTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTTGCTAGATTGCTTGATTGCCCAGAGGAGGAATTATTTTCAGAGGTGAATCAGTTCTTTTTAAACACGTGGGACAGACATGGAAGTGGGGAAAGGCCTGACGTTCCAAGTATTGACTTACAGCGTTTGAGTTTATCCAGTCATGACCAATTACAGAGGTCTGAGAATCTACGGAACAATAACCATAAAATTGATAATGCCTCCAATCATGAATCTACTGAAGGGAAACATGTTTCACAAAGTGTTCTTTCTCAGTACAGTAATTTATTATCTGGAAAGACATCTGGAAGTGTTGTTTCTACGGTGTCACATACTCAGAATCAAAAGAGTTATGGAAGCCAAAATAATTCAAAGACCTTTGATCATGTTAGGAGGGAAGCTAATTCTAATCAAGGTGCTAATTTTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACCTAGTGAGTGATGTTCAGGGAAGGTTTCTGTTTGCCAGGACACGTTCTAGCCCTGAGCTGACTGACTCATATGGTGATGTTTCCATCCAAGGAAGACATACAAAAACAACAGAAAGTAGTAAAGGCCAGAGTTCCTTTGTGAAGTTGGAGAATAGTCAAAGGAAGAATGTTGAACCTGATGTAGCTGTAAGGATGGATGAATCATCTGTTAGGCACATCTCATCTCGTCGAGTTCTTGAAAATGCTGCTGATTCAAACAGTAATCACGATGAGTCAAGCTCTGGTGTCACGAGTGAAGAGTTTGCTTCGGTTTCTGGTGCAGGTGGAATGCAGATGATGCATCAAGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCTCAGCTCAGGGTTTCAGTGGTCAGACTCATGTTCCAATGAATATTGCACCTGGTCACCTACCATTTCCCTTTCCACCTTCCATTCTTGCGTCAATGGGATATACTCAGAGAAACACGGGTAACATTCCCTTTATTGAGGCTCCTTGGGGTACAAATATGCAATTTCCTCAAGGTTTCATCCCACCATTGACTCCATATTTCCCTGGCATAGGAATGACCACAAGTCCTCAAGATTTTCTTGAAACTAACAATGAGAATTTCAATTCTGTTGAGGTGAATTTAGCAGAGGCTGATAATGATTATTGGCACGAACAGGAAAGGGGTTCTGCAAGTGAGGTTGAAGTCGATAATGGAAATCTTGAAATGCCCCCAGAGGATAGGCCGCAGTCTACTTCAGGGAGTTACAACTCTGCCTCGTTGTCTCGGGTAGGCAGCTCCAACAGTAACAGTTCTGCCGGAGTTCAGCAGAAGTTTACTAAAGAAAACCGAGTTTCAACCAGAGAAGAGCATATTGACAATTTTCATCTTCAGGATGGCCGAAGAAATGAGGTTTATTTTGATGATAGAACAGCAATTTCGGAGTTATCCAGTGCACCTCCTTCAAGCTCCTTCAGGAGTAGGACCCCTTCTGAAAGCTCTTGGGATGGATCATCGGTCAAATCCTCAAAATCAACAAGGGAGAGAAGGGGGAGGAAAAATAATCCCTCAATGCCATCTCAAAATCCTGTTTATGGGAAGGGTAAGAATGTTTCAGAAATTTCGTCTAATCAAGTGGACGATGAAAACAGAGAGTGGACTCCTTTGTCAACTGTGGCATCTGATATGCCAGAAAGAAGCACTTGGCCCACATCTGGTAGTTCCATACATGTTGCAAGGAATCAAATATCTAATTTTGAAACTGCTCAGACAAGTGGACCAGATTCTCCATTACCCATAGCTCCAGTGCTTATAGGGCCTGGTTCTCACCAAAGAGCTGTTGATAATTCTGGGGTTCTTCCATTTACGTTCTATCTTACAGGGCCACCTGTTCCCTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCGACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCTGAGGGATATGAACACCCCGAGGTTTCAAGCCCTTCCAATTCTATGACAAGGGTGGCTAACGAATCAGCAGAGCACAAGCCTGACATTCTTAATAGTGACTTCGTTAGTCATTGGCAAAATTTGCAATATGGCCGGTTTTGTCAAAACACGCGTCAACCACCTTCAATGATCTATCCTTCACCTGTTATGGTGCCTCCTGTGTATTTGCAGGGTCGATATCCTTGGGATGGGCCTGGAAGACCTATTCCTGGTAACATGAATATTTTTAGTCAGCTTATGAGCTATGGGCCACGTCTGGTTCCTGTTGCTCCTGTCCAGTCAGTTTCTAATAGACCTACCAATATTTACCAACGTTATGTGGATGATATGCCTCGGTATAGAAGTGGGACTGGAACCTACCTGCCAAATCCGAAGGTATCTGCTCGGGATCGGCACTCTGCAAATACCAGAAGGGGAAATTACAATTATGATAGAAGTGACCATCATGGTGATAGAGAAGGGAATTGGAATACCAACTCAAAAATCCGAGGAACTGGGCGTGGCCATAATCGCCACCAAATGGAGAAGTCCAGCTCAAAGCCAGAGCGGTTGTCTACCAGTGAGAGTCGTACTGACAGACCATGGGGTTCACACAGGCATGACACTTTCATTCCTCACCAAAATGGTCCAGTCCGCTCAAATTCCTCGCAGGGTAATTCTTCCAATGTAACTTATGGAATGTATCCTATACCGGCCATGAACCCAAGTGGAGTGTCATCAAATGGTCCAATGCAATCTGTTGTAATGTTTTATCCTTTTGATCATAATTCTGGCTACGGTTCACCGGCAGAACAGCTTGAGTTTGGGACTTTGGGACCAATGGGGTTCTCAGGTGTCAATGAACTATCACAGGTAAATGAGGGAAGTCAATCTAGTGGAGCACATGAAGAGCAAAGGTTTCGTGGTGGTCACACCCAACTGTCTTCACCAGATCAACCCTCCTCACCTCATGTCTCAAGGGCTCCGTGA 4014 0.4357 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCLVFTFGSVPLKTYLPDGDIDLTAFSENQNLKETWAHQVRDMLEKEEKNDNAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLDEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLNACSAVYAVFPGGQENQGQPFLSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEEELFSEVNQFFLNTWDRHGSGERPDVPSIDLQRLSLSSHDQLQRSENLRNNNHKIDNASNHESTEGKHVSQSVLSQYSNLLSGKTSGSVVSTVSHTQNQKSYGSQNNSKTFDHVRREANSNQGANFDKGQRNVKADNLVSDVQGRFLFARTRSSPELTDSYGDVSIQGRHTKTTESSKGQSSFVKLENSQRKNVEPDVAVRMDESSVRHISSRRVLENAADSNSNHDESSSGVTSEEFASVSGAGGMQMMHQEEQDLLNMMASPSAQGFSGQTHVPMNIAPGHLPFPFPPSILASMGYTQRNTGNIPFIEAPWGTNMQFPQGFIPPLTPYFPGIGMTTSPQDFLETNNENFNSVEVNLAEADNDYWHEQERGSASEVEVDNGNLEMPPEDRPQSTSGSYNSASLSRVGSSNSNSSAGVQQKFTKENRVSTREEHIDNFHLQDGRRNEVYFDDRTAISELSSAPPSSSFRSRTPSESSWDGSSVKSSKSTRERRGRKNNPSMPSQNPVYGKGKNVSEISSNQVDDENREWTPLSTVASDMPERSTWPTSGSSIHVARNQISNFETAQTSGPDSPLPIAPVLIGPGSHQRAVDNSGVLPFTFYLTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDSSQNFDSSEGYEHPEVSSPSNSMTRVANESAEHKPDILNSDFVSHWQNLQYGRFCQNTRQPPSMIYPSPVMVPPVYLQGRYPWDGPGRPIPGNMNIFSQLMSYGPRLVPVAPVQSVSNRPTNIYQRYVDDMPRYRSGTGTYLPNPKVSARDRHSANTRRGNYNYDRSDHHGDREGNWNTNSKIRGTGRGHNRHQMEKSSSKPERLSTSESRTDRPWGSHRHDTFIPHQNGPVRSNSSQGNSSNVTYGMYPIPAMNPSGVSSNGPMQSVVMFYPFDHNSGYGSPAEQLEFGTLGPMGFSGVNELSQVNEGSQSSGAHEEQRFRGGHTQLSSPDQPSSPHVSRAP* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00233 1337 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1292 1311 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 439 465 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1222 1237 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 742 778 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1145 1171 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 976 1022 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 557 597 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 394 425 - -
Lapu10g00233 1337 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 570 592 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 723 793 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1292 1337 - -
Lapu10g00233 1337 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1333 - -
Lapu10g00233 1337 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 400 417 - -
Lapu10g00233 1337 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Lapu10g00233 1337 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 513 543 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 976 1026 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 852 903 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1183 1215 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1128 1237 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 779 793 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 1318 1337 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 812 903 - -
Lapu10g00233 1337 CDD NT_PAP_TUTase 59 166 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 439 463 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 812 838 - -
Lapu10g00233 1337 MobiDBLite consensus disorder prediction 513 544 - -
Lapu10g00233 1337 Gene3D - 162 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00233 Lapu-Chr10 4330733 4339172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00233 - - gmx:100809742 2354.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00233 10 4330733 4339172 Lapu10g00233 10 4330733 4339172 ECH
Lapu6g01944 6 19296961 19304137 Lapu10g00233 10 4330733 4339172 PCT