Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00232 ATGATGAACGGAGACTCTCGTGGTGCTCTTGAGACACAGTACATAAGGAGGCATCACAGACATGAACCAAGGGAAAACCAGTGCACTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATATAAACCATTTGTTAGCAGATGTATCATGCAAGGGGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTAAAATCTGGACTTCCAGCCACAACAAGCACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATAACCGTCCATCCAGAGGTCATTGAGGGGAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGGAACACCAAGGATGAAACTTGTTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCACTGGCTGATGTCTCAGAGAGGATGGCAGTGCAAGGTCGAACCGATCCCATCAACCATTAA 558 0.4588 MMNGDSRGALETQYIRRHHRHEPRENQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00232 185 PANTHER - 25 169 - -
Lapu10g00232 185 SUPERFAMILY Bet v1-like 28 169 - -
Lapu10g00232 185 FunFam Abscisic acid receptor PYL9 2 181 - -
Lapu10g00232 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Lapu10g00232 185 CDD PYR_PYL_RCAR_like 28 172 - -
Lapu10g00232 185 Gene3D - 3 181 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00232 Lapu-Chr10 4291313 4295638 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00232 K14496 - gmx:100500065 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00232 10 4291313 4295638 Lapu8g00773 8 25790681 25791244 ECH
Lapu10g00232 10 4291313 4295638 Lapu10g00232 10 4291313 4295638 ECH