Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00226 ATGGTGAAGAAAGTGAGGTCTGATTCGGGACCATTGTCCCTGCAAAAGCACAACCATGTGTGTGTCAAGTTAGGAGTCTCGATTTTCTTGGTTGGTCTCGCTGTTCGCCTTCTCTTGTGGGATTCATTCAGTTTCTCATCAGTGGTGGAGACACCTCCTCTGGAAGATGCAAAAGCGGATTCCTCTGTTTTATCTTCCTCTGATCTTCAGGCTTCTGATTCTGATGACTTTCCGGAAAGTCATCGGAACCAGACTCAAATCTCTAAGGATGAAAAATGTGATCTTTTTGTGGGAGAATGGGTGCCAGACCAATCTGGGCCAGTGTACACTAATGAGAGCTGCCGTGTGATTGAGCCCCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGGGTACCTTTACTGGAGGTGGAGTCCAAGAGACTGTGAATTGCCCAAGTTCATTCCCAAGAAGTTTCTTAAGTTCATGAGAAATAAATCATTGTCCTTCATTGGTGATTCCATCTCCCGTAACCATGTTCAGTCCCTACTTTGCATTCTCTCAAAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGCTCTCATAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTTAAAGCAGCTATATTTGAGGACATGAATGGAGTTACCTCATCAGAGATACAACTTTATCTTGATACTCTAGACCAGTGGACCAACCAGTATGAGAACTTTGACTACGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAATAGTACAGTCACCGGCTGCCACTATTGCCCTGGAAGGAACTTAACAGAGCTAGGATTTGACTATGCATACCGCAAAGTACTACAAGAAGTTTTCAAGTTCTTCACAAACTCTAACCACAAAGCCACTGTTCTCTTCAGAACCACCACACCTGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTACTGCAATAGAACTGTACCCTTCAAAGAGGGTCAAATACATATGATAGATGTAGATTCCATCATGAGAGGTATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCCCTAGGATCTCAAAGGGTAAACTTGCAACTTTTGGACACAACTCTCCTTTCGTTGCTGAGACCAGATGGACATCCTGGACCCTACAGGAAGTTCCAGCCATTTGCAAAAGACAAGAATGCTAAAGTTCAGAATGACTGTCTACATTGGTGTTTGCCAGGACCAATTGACTCATGGAATGACATAATAATGCAAATGCTACTCAATGCCTAA 1317 0.4305 MVKKVRSDSGPLSLQKHNHVCVKLGVSIFLVGLAVRLLLWDSFSFSSVVETPPLEDAKADSSVLSSSDLQASDSDDFPESHRNQTQISKDEKCDLFVGEWVPDQSGPVYTNESCRVIEPHQNCMKNGRPDSGYLYWRWSPRDCELPKFIPKKFLKFMRNKSLSFIGDSISRNHVQSLLCILSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSSEIQLYLDTLDQWTNQYENFDYVVIGGGKWFLKTAIYHENSTVTGCHYCPGRNLTELGFDYAYRKVLQEVFKFFTNSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKAASLGSQRVNLQLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLLNA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00226 438 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 434 IPR026057 GO:0016740
Lapu10g00226 438 Pfam PMR5 N terminal Domain 91 144 IPR025846 -
Lapu10g00226 438 MobiDBLite consensus disorder prediction 59 86 - -
Lapu10g00226 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 49 431 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00226 Lapu-Chr10 4233449 4237470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00226 - - gmx:100305942 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00226 10 4233449 4237470 Lapu10g00226 10 4233449 4237470 ECH
Lapu6g01954 6 19380604 19383997 Lapu10g00226 10 4233449 4237470 PCT