Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00225 ATGGAAGACTCAACCAAGTTGCGTTTGGTGAGGTGCCCAAAGTGTCAAAATGTTCTTCCTGAGCTTGCCAATTACACTGTTTATCAATGTGGTGGTTGTGATACTGTTCTTCGAGGAAAGCTTAAAAGTTCTGAAGGTGGTAGGTTGTGGGAAGCGTCAGATGAGGGACAAGGTAGAGGAGATCATGCTAGATCAGAAAGCTTCTTGGGTAAAGGGGTAGTTGATTTGAGTGATAATTCAGATGTTGATATTAGGTCCAATGGTGGTTTCGCAAGGGAGGGTCAAAGAAGGGATTCGGGGAAACCAAATAAAGGACGTGAGAAGTTTTTGGATGATTCGATAGATGGGGATGAGAAAGGAGTTTGGGAGAATGATTTTGTCAATAAGGACAAAAGGGGTAAATCAATTGGAAGAGAGCAGCAGGAGCAGAAGTCTCACATGGGAGGGGACCAATTCTATGGGAGAGTGTCTGATTGGCCTTATGGGGAGAGAAGTGAGATGGAGGGGTTTCGGAGAAAGCCTCAAGCTGATATGGAGGGTGTCAGATTTCCCACTTATAGTTATCCTGATGAGGGATCTTCAAATAGCTATTCCAGTTTTTCTTACAATTATGGAGAACAGTGGAGGAATTTCAAGGACATGGATGGTGTGAATAGGGTTCAGCTTCTTGAGCAAAATCGGGCTGATATTCTAAGGAAGCTGGATGAGTTAACCAGCCAATTGAACAAGTCTTCTGAGGTGGTTAGTAACCCCAAAGAAAAGGTTCATAATGACGAAAAAATGGTTCCTCCATATCCTTATAGTGTCCCTGAAACTTGGTTTCCAGATGGATATGGATCATCAGCTATGAACAGGACCTCAAGACAATTCTTTGGCCCTAATAAACATATGGCACGTCCCCCTTATTTCAATTATCATCATGATCCTCATGCTTATGCAGCAGGTCCTGAAATGGCTATGCGCAACTTTCACCCTTCCATGCATAATCCAAATTATGTTCCTGGATACGGGGATCCTTTTGTATCCCCAATGATGAGAGATTCACATCCTTTACCCCATCAGTTCCCACCAAAACCAATGCATCCCTACTTTCCTGGACGCTATGCTGATACTGGTCCAGATTCATATGATCCATATGCTCGTAATGTTATGCTCCATCCACCTTCTTGCTCTTGTTTTCGTTGCAATAACAACAAAAGAAGAGAATCAGGACCAGTGCCACCTGCTGCATTTGTTAACAGCAGATTCCCTCATACCCCTGCGCCAAATGATCCTATGATGTACGGTCATGAGATCCCAGGGGCAGTTGGTCCTTATGTTCATAATTCTAGAGCTGCCATTTCTGCCACGGGTTTACATGAAAGACAACTGCGTACAAGATGGCCTAGAGACTACAGTTCTGAGATGGGTGGGTTTGTTGGAAGCCATCCTCGAAAAGTAGTGCCTGTGAGTGGTACTCGGCAATGCCTTCCTATAGCTGGTGGTTCTCCTTTCATCACTTGTCATAATTGCTTTGAGTTACTACAACTGCCTAAAAAGACACTGGTCATGGTTAAAAATCGTAAGCACAAGATGCGATGTGGAGCTTGTTCTTCAGAAATAAAACTTGCTGTCATCAATAAGAAGCTAGTAATTTCTCCTCATTCTGAAGTGGAGGCAACTGCCACATCCACAAGGGTTGATGATGCCACTAGTAAGGTTGTGAATAGTCGTGTATTCCATTCCCGTGGTGATGTGAACACGAGTGGTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCAGTTGATAGAGAATCTTCTGCGCTGGCTGAAGACTCCACCTTAAAGTCGCGAGGGATGCAAAGTTTCCATTCTTCATCTCCCAGTATTTCTGATGATGAAAATAGTCCAGAAATTATGACTGCACCAAGTGAAGCTACTAAGTCCATTCATCAGCCATCTAAAGCCTCTCGATCTCCTTCACCTGGTGGTTCATTTAATGATCACGCGGTAAATCGACTAGGGAAAGGCAACCAGAGCAGTCGATCAGATCAAGAGATGGAAAAAATAGAGAAGAATGCCTCGAGGCAAAATTCTTTTAAAGAAGTAGTGCTTGCAACTGAGATGGATGTCAATGATTATTCTAACACTGGGGTCTCTCAGGATTCGGGTGATGCAAGCAGAGAACATGATCATCCTAGGTCTAATAAAAGGGGTGATTCATTTTTAGCAAACATTATCAAGAAAGATAATGGGAAAAGTAATGTTACTGTAAATGGACAGCCATTACCAGATCGAGTGATTAAAAAGGCTGAAAAGGTTGCTGGACCAATCCAGCCAGGAAATTACTGGTATGATTCTCAGGCTGGATTTTGGGGTGTCATGGGTGGACCGTGTCTTGGGATAATTCTGCCATTCATAGAAGAGTTCCAGCATCCCATGCCAGAAAACTGTGCTGGTGGAAATACGGGTGTTTTTGTAAATGATAGGGAACTTCACCAAAAGGATTTGGATTTGCTTTCTCGTAGAGGGCTTCCTCGCGATAGCAATAGATCTTATATCATTGAAATTTCTGGGAGGGTTCGGGATGCATACACAGGAGAAGAGCTGGACAGCCTTGGTAAACTTGCACCAACAGTGGAGAAAGAAAGGCGTGGATTTGGCATGAAAGTACCAAGAGCAGCTGCATAA 2682 0.4336 MEDSTKLRLVRCPKCQNVLPELANYTVYQCGGCDTVLRGKLKSSEGGRLWEASDEGQGRGDHARSESFLGKGVVDLSDNSDVDIRSNGGFAREGQRRDSGKPNKGREKFLDDSIDGDEKGVWENDFVNKDKRGKSIGREQQEQKSHMGGDQFYGRVSDWPYGERSEMEGFRRKPQADMEGVRFPTYSYPDEGSSNSYSSFSYNYGEQWRNFKDMDGVNRVQLLEQNRADILRKLDELTSQLNKSSEVVSNPKEKVHNDEKMVPPYPYSVPETWFPDGYGSSAMNRTSRQFFGPNKHMARPPYFNYHHDPHAYAAGPEMAMRNFHPSMHNPNYVPGYGDPFVSPMMRDSHPLPHQFPPKPMHPYFPGRYADTGPDSYDPYARNVMLHPPSCSCFRCNNNKRRESGPVPPAAFVNSRFPHTPAPNDPMMYGHEIPGAVGPYVHNSRAAISATGLHERQLRTRWPRDYSSEMGGFVGSHPRKVVPVSGTRQCLPIAGGSPFITCHNCFELLQLPKKTLVMVKNRKHKMRCGACSSEIKLAVINKKLVISPHSEVEATATSTRVDDATSKVVNSRVFHSRGDVNTSGVNFSSDDYSGYDFHSVDRESSALAEDSTLKSRGMQSFHSSSPSISDDENSPEIMTAPSEATKSIHQPSKASRSPSPGGSFNDHAVNRLGKGNQSSRSDQEMEKIEKNASRQNSFKEVVLATEMDVNDYSNTGVSQDSGDASREHDHPRSNKRGDSFLANIIKKDNGKSNVTVNGQPLPDRVIKKAEKVAGPIQPGNYWYDSQAGFWGVMGGPCLGIILPFIEEFQHPMPENCAGGNTGVFVNDRELHQKDLDLLSRRGLPRDSNRSYIIEISGRVRDAYTGEELDSLGKLAPTVEKERRGFGMKVPRAAA* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00225 893 MobiDBLite consensus disorder prediction 679 693 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 130 155 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 721 735 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 130 145 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 607 693 - -
Lapu10g00225 893 Pfam Probable zinc-ribbon domain 493 537 IPR021480 -
Lapu10g00225 893 Coils Coil 220 240 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 90 116 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 609 678 - -
Lapu10g00225 893 MobiDBLite consensus disorder prediction 80 116 - -
Lapu10g00225 893 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 885 IPR040244 GO:1900150
Lapu10g00225 893 MobiDBLite consensus disorder prediction 709 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00225 Lapu-Chr10 4223574 4228255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00225 - - gmx:100798240 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00225 10 4223574 4228255 Lapu10g00225 10 4223574 4228255 ECH
Lapu6g01956 6 19390533 19392539 Lapu10g00225 10 4223574 4228255 PCT