Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00212 ATGAAGGCTCTAAGACTTCTCTTCATTATTACTTTTCTTGGTTCATTCTTCCTTGCTAGCCCTGAAGCAGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCTATCCCCTTTGATACAACCAACCTTCACTGCCTTTCTGTATGGGATGCGCAAAGTTTCATCCTCAGATATGCTCAGACTTACGCAAACATTTGGAGCTTCATTCTCTCAACCCCAGACACAAATTCTTACATAGCCATGGGATTCTCTGTCAGTGGCGGCATGGTTGGTTCAAGTGCTATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGTGTCACTCCGAATCAGGTTGTTCCTGATAAGGGCAACCTACAGGTTATAGCCAATTCAACCTTCATCACTTTACAGTCCTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCGCTGAACCTTTGTCCTCGCTGATATTTGCCACTGGATCTACCGGTTTATTTCCTGCACCACCGAGCTTTGCACTGACAAAACACCTGGACAAGGTTTCCACAAAAATAGACTACTCAAAAGCAAACGTTGGAAGTTCACAAGATGGAAATTCTTCACAAGTAGATGGAAGTACTTCGCAAGCCGCAGATTCTTGTGCCTCCAAGCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCAGGGATTCATCCTTAGATATTCTCAGACTTCTCCTAGCATATGGAGCTTCATTCTCTCAGCACCCAACACAAATTCTTACATAGCAATGGGGTTCTCTCCCAATGGAGGCATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAGTGGGGCAGGTGGAGGCATGAAACAGTATTATCTAACAGGACTCGCACCAAACCAAGTGGTGCCTGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGACCTTCCAGTTAGAAACCAACCAACCTCTGTCCCGGTTGATCTATGCCTTTGGACCTAACGGTGTGTTCCCTTCAACACCAAGTTTTGCATTAACGCAGCACCAAGACAAAGTCTCCATTACGTTGAATTACGCAACAGGTTCAAGTGCATTAGGAAACTCATATATGAACCTGAAAAGAAGCCATGGAGTGTTGAATATCTTGGGATGGGGAATCCTTATCATAATGGGAGCAATAGTTGCTCGTTACTTCAGGGAATGGGATCCATTTTGGTTTTATTTCCACGCTTCAGTTCAATCCTTGGGTTTTGTTCTGGGAGTAATTGGTGTAATTAGTGGTCTTGTGTTGAATAATCAACTCCATGTTGACGTTAATCTTCACAAGGCTCTTGGAATCATCATTTTCGTTCTAGCCTGCCTCCAGATAATGGCTTTGCTTGGTCGACCAAAGAAGGAAGCAAAAGTGAGAAAGTATTGGAATTTATACCATCATAACGTGGGGAGAATTTTGATTATACTGGCTGTGGCTAACATTTTCTATGGAATCCAATTAGGGAAGGAGGGAAGTGGATGGAATATAGGTTATGGGATTGTGCTGGCCATATTACTCACTATGGCAATTACTTTTGAGACACAGCTCTGCAGTAGAGACTAA 1665 0.4396 MKALRLLFIITFLGSFFLASPEADSCTSNLSLNVSIPFDTTNLHCLSVWDAQSFILRYAQTYANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSTFITLQSSRLFMVFQLQTAEPLSSLIFATGSTGLFPAPPSFALTKHLDKVSTKIDYSKANVGSSQDGNSSQVDGSTSQAADSCASKLNLSVPLLFDTTNLNCLPVWNAQGFILRYSQTSPSIWSFILSAPNTNSYIAMGFSPNGGMVGSSAIVGWISSSGAGGGMKQYYLTGLAPNQVVPDRGNLKVLTNSTFITSQSSRLYMTFQLETNQPLSRLIYAFGPNGVFPSTPSFALTQHQDKVSITLNYATGSSALGNSYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHASVQSLGFVLGVIGVISGLVLNNQLHVDVNLHKALGIIIFVLACLQIMALLGRPKKEAKVRKYWNLYHHNVGRILIILAVANIFYGIQLGKEGSGWNIGYGIVLAILLTMAITFETQLCSRD* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00212 554 CDD Cyt_b561_FRRS1_like 376 547 - -
Lapu10g00212 554 ProSiteProfiles DOMON domain profile. 243 355 IPR005018 -
Lapu10g00212 554 SMART 561_7 398 519 IPR006593 -
Lapu10g00212 554 CDD DOMON_DOH 44 180 IPR045266 -
Lapu10g00212 554 ProSiteProfiles DOMON domain profile. 52 164 IPR005018 -
Lapu10g00212 554 Gene3D - 374 550 - -
Lapu10g00212 554 ProSiteProfiles Cytochrome b561 domain profile. 362 554 IPR006593 -
Lapu10g00212 554 SMART DOMON_3 269 355 IPR005018 -
Lapu10g00212 554 SMART DOMON_3 78 164 IPR005018 -
Lapu10g00212 554 Pfam Eukaryotic cytochrome b561 399 519 IPR006593 -
Lapu10g00212 554 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 214 551 - -
Lapu10g00212 554 CDD DOMON_DOH 243 376 IPR045266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00212 Lapu-Chr10 4030572 4045632 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00212 - - gmx:100803524 984.171