Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00208 ATGTTTTTCAGTTTTTCACTGTCACCATCACCACTAGGTTCCAAAATGTCAGAGAAGAAGAAGAAGAATATACGTGGAAGGAGCATTGTTGAGGCGAGCAAAAAGCCGCAACCTTTGGTGGAAGTGGAAGACATAGAGGACGCTATGTCGTTCTCCAAAGACGAGACTCACAAACTGAGACTGACCCTTTTGGACTGGTACGACCTAAACCGAAGGGACCTTCCTTGGAGAACACATCACCTTGAAGATGAGGAGAAACAAGAAGAGGAAGAAGAAGAAGTGGAAAGAAGAGCTTATGGGGTGTGGGTATCGGAGGTTATGCTGCAGCAAACAAGGGTTCAGACTGTTATTGCATATTACAATCGTTGGATGCAAAAATGGCCCACCATTTACCATCTTGCACAAGCTTCTCTCGAGGAAGTAAATGAGATGTGGGCTGGTTTGGGCTACTACCGAAGAGCTCGTTTTCTTTTAGAGGGGGCAAAGAAAGTTGTTGCAGAAGGAGGCAAAATTCCTAAAGTGGCTTCTATGCTACTAAAGATTCCTGGAATTGGAGACTACACATCCGGAGCAATTGCTTCTATTGCATTTAAAGAGGTGGTACCTGTTGTTGATGGAAATGTGGTAAGGGTGATTGCTAGACTAAGGGCTGTTTCTGCAAATCCAAAAGACTCAGCGACGATTAAGAGATTTTGGAAATTAGCAGCTCAGTTGGTGGATCCTGTTCGTCCTGGGGACTTCAATCAGGCTCTCATGGAACTTGGGGCAACTGTATGCACTCCTTTGAACCCAAGCTGTTCCTCATGTCCAGCATCAGAATTTTGTCAAGCACTATCAAATGCTAAACATGACAGTGCAGTAGCAGTTACAGATTATCCCGTTAAGGGTGTGAAGGTTAAACAAAGACGTGATTTCTCTGCTGTATGTGTTGTTGAATTACTTGGAGCTGAAGCATTGTTAGATAAAAACCAGTCTATTAGCAAGTTCATTCTTGTCAAAAGGCCCGAAGAAGGGTTGCTTGCTGGTCTCTGGGAGTTTCCATCTGTCTTACTGGATGGAGAAACAGTTCCATCGACTAGAAGAGAAGCAATGGATCGCTTCTTGAAAGATAATTTCAAAATTGATGTCAGAAAGACTTGCAATATAGTTTTGAGGAAAGATATTGGGGAATTTGTTCACATTTTCAGTCACATTCGCCTCAAGTTGTATGTGGAATTGCTAGTGTTACAATTTAAAGAAGGGGAAGATGATTTGTTCCAAAGCCCAGATAATAAACCAACTTGGAAATGCGTTTACAGCAATGAACTTTCTAGTATGGGACTGACAACAAGTGTAAGAAAGGTCTACAACATGGTTCAAAACTTTAAGCAGAAAGCTCTTCCTTCTAACTATGTGCCAACCAAAAAGAGAACTAGAACGACACAAAGAACCTAG 1434 0.4219 MFFSFSLSPSPLGSKMSEKKKKNIRGRSIVEASKKPQPLVEVEDIEDAMSFSKDETHKLRLTLLDWYDLNRRDLPWRTHHLEDEEKQEEEEEEVERRAYGVWVSEVMLQQTRVQTVIAYYNRWMQKWPTIYHLAQASLEEVNEMWAGLGYYRRARFLLEGAKKVVAEGGKIPKVASMLLKIPGIGDYTSGAIASIAFKEVVPVVDGNVVRVIARLRAVSANPKDSATIKRFWKLAAQLVDPVRPGDFNQALMELGATVCTPLNPSCSSCPASEFCQALSNAKHDSAVAVTDYPVKGVKVKQRRDFSAVCVVELLGAEALLDKNQSISKFILVKRPEEGLLAGLWEFPSVLLDGETVPSTRREAMDRFLKDNFKIDVRKTCNIVLRKDIGEFVHIFSHIRLKLYVELLVLQFKEGEDDLFQSPDNKPTWKCVYSNELSSMGLTTSVRKVYNMVQNFKQKALPSNYVPTKKRTRTTQRT* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00208 477 FunFam Adenine DNA glycosylase 298 458 - -
Lapu10g00208 477 Pfam HhH-GPD superfamily base excision DNA repair protein 103 236 IPR003265 GO:0006284
Lapu10g00208 477 CDD DNA_Glycosylase_C 302 452 IPR029119 -
Lapu10g00208 477 SMART endo3end 107 257 IPR003265 GO:0006284
Lapu10g00208 477 Pfam NUDIX domain 328 449 IPR029119 -
Lapu10g00208 477 SMART ccc3 258 278 IPR003651 GO:0051539
Lapu10g00208 477 FunFam Adenine DNA glycosylase 73 202 - -
Lapu10g00208 477 FunFam Adenine DNA glycosylase 196 278 - -
Lapu10g00208 477 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 298 459 - -
Lapu10g00208 477 SUPERFAMILY DNA-glycosylase 59 280 IPR011257 GO:0003824|GO:0006281
Lapu10g00208 477 Gene3D Hypothetical protein; domain 2 73 202 - -
Lapu10g00208 477 PANTHER ADENINE DNA GLYCOSYLASE 19 459 IPR044298 GO:0006284|GO:0016798
Lapu10g00208 477 CDD ENDO3c 99 255 IPR003265 GO:0006284
Lapu10g00208 477 MobiDBLite consensus disorder prediction 1 28 - -
Lapu10g00208 477 Gene3D - 59 277 IPR023170 -
Lapu10g00208 477 SUPERFAMILY Nudix 293 452 IPR015797 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00208 K03575 - gmx:100818278 781.556