Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00206 ATGGGAAAGGCCGTGATTAATGCAGCGGAAGCTGCTGGACTAAATGTTGTTCCTGTGTCATTTGGGTGTGAAGAGGAGTCTGGACAGACTTTTGAGATCGGTGGAAAGGATTTTCTTGTGCATGGTCCTTCTGACAGGGAGAGTGTTCTTGCATCTGCTCTTGAAAAATATCCAAATTTGATTGTTGTGGACTACACAGTACCAAATGCGGTTAATGGCAATGCTGAGCTATACTGTAAGGTTGGGGTGCCCTTCGTGATGGGAACCACTGGTGGAGATAGGGATTTGTTGCGTAAGACTGTTGAAAACTCAAAGAATTATGCTGTGATATCCCCGCAAATGGGAAAGCAGGTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCAGAGCAATTTCCTGGAGCCTTCTCAGGGTATTCCTTACAGGTACTGGAGTCCCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCAAAGGCTGTCATTTCTTCCTTCAACAAACTGGGGGTGTCTTTTGATATGGATCAGATAAAATTGATCAGGGATCCCAGGCAACAACTTGAAATGGTTGGAGTCCCAGAGGAGCATTTGTCCGGTCATGCATTTCATATGTATCATTTGACATCACCCGATGACACGGTTACTTTTGAATTTCAACATAATGTTTGTGGTAGATTATATGCAGAAGGCACTGTTGATGCTGTATTGTTTCTTGCTAAGAAGCTCAGCATTTCTGAGATAAAAGTACAACTGCACTTTGACTGCCAAAGAATGTCATAG 780 0.4321 MGKAVINAAEAAGLNVVPVSFGCEEESGQTFEIGGKDFLVHGPSDRESVLASALEKYPNLIVVDYTVPNAVNGNAELYCKVGVPFVMGTTGGDRDLLRKTVENSKNYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISSFNKLGVSFDMDQIKLIRDPRQQLEMVGVPEEHLSGHAFHMYHLTSPDDTVTFEFQHNVCGRLYAEGTVDAVLFLAKKLSISEIKVQLHFDCQRMS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00206 259 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 116 223 - -
Lapu10g00206 259 Pfam Dihydrodipicolinate reductase, C-terminus 118 241 IPR022663 GO:0008839|GO:0009089
Lapu10g00206 259 Gene3D - 1 147 - -
Lapu10g00206 259 Pfam Dihydrodipicolinate reductase, N-terminus 1 113 IPR000846 GO:0008839|GO:0009089
Lapu10g00206 259 NCBIfam dihydrodipicolinate reductase 1 249 IPR011859 GO:0008839|GO:0009089|GO:0070402
Lapu10g00206 259 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lapu10g00206 259 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 241 IPR036291 -
Lapu10g00206 259 PANTHER DIHYDRODIPICOLINATE REDUCTASE 1 245 IPR023940 GO:0008839|GO:0009089
Lapu10g00206 259 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00206 Lapu-Chr10 3986174 3991644 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00206 K00215 - gmx:100819889 450.284