Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00204 ATGGCAGCGGCGGCGGCAGTGACGGTTCTACTCCCACCTAGGATTCCGACCACCACCAACGTTACCCGCTGTTCTGCTTTGCCTTCTCTGCCTCCACGTGTCACCAACACCAGCACCACCTTGTTCTTACCTTCCCTCAACCACTTTTCAGTGTCCCGAAAATCTTCTCTGCTTCAGACCAGAGCTTCTTCGGAGGAATCATCCTCTGTAGATGCCAATGAGTTGTTCACAGATTTGAAGGAAAAGGCAAGAATGGAAATAATATCCTCCATTTATCATAATCAGTGGGATGCTGTTGAAAACAAGTCCACAGTGCTTATTTATGGTGGTGGGGCTTTAGTTGCTGTTTGGCTATCTTCAATTCTCGTGAGCGCAATCAACTCAGTTCCCTTGCTTCCAAAGATTATGGAGTTGGTAGGTCTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTTCAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGAGGTACTGAAGAAGAAAATCACTGGAACTGAATAG 531 0.4689 MAAAAAVTVLLPPRIPTTTNVTRCSALPSLPPRVTNTSTTLFLPSLNHFSVSRKSSLLQTRASSEESSSVDANELFTDLKEKARMEIISSIYHNQWDAVENKSTVLIYGGGALVAVWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEVLKKKITGTE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00204 176 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 93 174 IPR025564 -
Lapu10g00204 176 PANTHER - 16 175 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00204 Lapu-Chr10 3982423 3985870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00204 - - gmx:100305578 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00204 10 3982423 3985870 Lapu10g00204 10 3982423 3985870 ECH