Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00178 ATGGCTACCAATTCCATTTCCTCATCCTCCTTTCGATTAGTTACTACCAGAATCCCTCTCTCCCTCTTCCGCAAAACCCCAACTCTCCTTCCTCCTCTAACAAAACCCCCCTTCTCTAAATCCATTACCTTCCAGAGACTTCCATCATCATCATCATCATCACCCTCCCCATCATCCACATCCCTTCAACCCATCGAAGACCTCCCTCCCAAGCTCCAAGAAATCGTCCACCTTTTCCAATCCGTTCCCGAACCCAAGGCCAAATACGAACAGCTCCTCTTCTATGGCAAAAACCTCAAACCCCTCGAACCCCACTTCAAAACCAACGACAACAAGGTCCAAGGTTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTCGACCCCAACCGCCACGTCATCTACGAAGCCGACTCCGACTCCGTCCTTACAAAAGGCCTCGCCGCGTTGCTCGTTCAGGGCCTATCGGGTCGACCCGTCAGTGAAATCATTCGGGTCACGCCCGATTTCGTCACGCTGTTAGGGTTGCAGCAGAGCCTAACCCCCTCGAGGAACAACGGGTTCTTGAACATGCTTAAATTGATGCAGAGAAAGGCGCTTATGTTGTACGTGGAAGCTGAAAAGGGTGGTGAGTTCACTGAATCAAAGTCACCTGAGTCGAATTCTGATAGCATTATTGAGAATTCTTCTGGGGGTGGAGAAAGTTCTGAACTTGGTGATCCCGAGGGTGATGTTGGTTTGGATTCTGAGGGTGATGTGGAATTGGGAGGGAGGGGGAAGAGGATAAGGGAGAAGTTGAAGAAAGAGCTTCATCCTGTTGAGTTGGAGGTTGAGGATGTGTCTTATCAGCATGCCGGGCATGCTGGGGTTAGAGGGAGTGATGGAGAAACGCACTTCAATGTTAAAGTTGTGTCTAGAGAGTTTGAAGGGAAGAGTTTGGTTAAGAGGCATAGGCTTATTTATAGTCTTCTGCAAGAGGAGTTGGAGACTGGACTGCATGCCTTGTCAATAGTGGCAAAGACTCCTGCTGAAGTTGAAGGATGA 1041 0.4986 MATNSISSSSFRLVTTRIPLSLFRKTPTLLPPLTKPPFSKSITFQRLPSSSSSSPSPSSTSLQPIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDPNRHVIYEADSDSVLTKGLAALLVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKALMLYVEAEKGGEFTESKSPESNSDSIIENSSGGGESSELGDPEGDVGLDSEGDVELGGRGKRIREKLKKELHPVELEVEDVSYQHAGHAGVRGSDGETHFNVKVVSREFEGKSLVKRHRLIYSLLQEELETGLHALSIVAKTPAEVEG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00178 346 MobiDBLite consensus disorder prediction 210 257 - -
Lapu10g00178 346 Gene3D - 256 346 IPR036065 -
Lapu10g00178 346 FunFam SufE-like protein, chloroplastic 255 346 - -
Lapu10g00178 346 MobiDBLite consensus disorder prediction 214 234 - -
Lapu10g00178 346 SUPERFAMILY BolA-like 259 345 IPR036065 -
Lapu10g00178 346 Pfam BolA-like protein 265 343 IPR002634 -
Lapu10g00178 346 Pfam Fe-S metabolism associated domain 78 197 IPR003808 -
Lapu10g00178 346 MobiDBLite consensus disorder prediction 43 65 - -
Lapu10g00178 346 Gene3D - 68 208 - -
Lapu10g00178 346 PANTHER - 61 345 - -
Lapu10g00178 346 SUPERFAMILY SufE/NifU 66 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00178 Lapu-Chr10 3614285 3619283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00178 K22066 - gmx:100779254 500.745