Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00161 ATGAAGAAGTTTGTACTCAAGTTGGATTTGCATGATGATAAGGATAAGCAGAAGGCCCTGAAAACAGTTTCAACTCTTTCAGGAATTGATGCCATCTCCATGAACATGAAAGAGAAGAAGTTAACAGTGATAGGAACAGTTGATCCAGTAAGAATTGTGAGCAAATTGCGTAAGTACTGGCAGACAGACATAGTGGAAGTAGGACCAGTGAAGGAGCCAGAGAAGAAAGAGGATGCTAAGAAAGCAGAGGCCAAGAAGGAGGGAGACAAGAAAGAGGAGCAAAAGAAGGAAGAGGGCAAGAAAGAAGAAGGAAAGAAAGATGAAAAGAAGGAAGATGAGAAAAAGAAAGAGCCACTCCCAGATCCTGTTTTGGAATGGGTCAAGGCACATAGGGCGGCATATAACCCCTACATGACCACACACTACTATGCTCCAAGCATAGAAGAGAATCCCAATGCATGTGTCATTTGTTAA 474 0.4241 MKKFVLKLDLHDDKDKQKALKTVSTLSGIDAISMNMKEKKLTVIGTVDPVRIVSKLRKYWQTDIVEVGPVKEPEKKEDAKKAEAKKEGDKKEEQKKEEGKKEEGKKDEKKEDEKKKEPLPDPVLEWVKAHRAAYNPYMTTHYYAPSIEENPNACVIC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00161 157 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 154 - -
Lapu10g00161 157 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
Lapu10g00161 157 Pfam Heavy-metal-associated domain 9 59 IPR006121 GO:0046872
Lapu10g00161 157 MobiDBLite consensus disorder prediction 70 123 - -
Lapu10g00161 157 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Lapu10g00161 157 Gene3D - 1 72 - -
Lapu10g00161 157 Coils Coil 76 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00161 Lapu-Chr10 3386820 3389841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00161 - - gmx:100499838 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01510 1 27889869 27893392 Lapu10g00161 10 3386820 3389841 PCT