Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00115 ATGTCTAAGTCTGAATATGTTGTTGAGCTTCCTATTTTAGACATTTCTCAGCCATTACAGCCATCTTCTCTAACCTCTCTCTCTAAAGCCTGCAAAGATTGGGGATTTTTCCACATCATCAATCATGGGATCTCCAAAGATCTTTGCAGCCAGATCCATTATTTATCCAAATACCTCTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCCTCTGTAAAGTCTTACACCCCTCACTTCATTGCTTCTCCATTCTTTGAGAGCCTCAGAATTAATGGACCAAACTTCTATGCTTCTGCTAAGAGTTCTGAAGACATCCTCTTTGACAAACAGAGTTCCAAATTCAGTGAGACACTGCAAGAATATTGTAGTAAGATGGCTGATCTGTCTGAGAAAATTCTAAAGCTTGTGCTGATGAGCTTAGAGGATGGCTTTGATAACCTGTTCTATGATTCAGAATTCAAGAAGTGTCATGGTTACTTGAGGATAAACAACTATTCTGCTCCAGAAAGTTTGGAGGATCAAGTTGAGGGGCTTGGAATGCACACTGATATGAGTTGTATCACCATCTTATATCAAGATGAAATAGGAGGGCTTCAAGTGAAGTCACATGAGGGAAAGTGGATAGACATAAGCCCTTCTGAGGGGACCCTGGTGGTGAACATAGGGGATATGATGCAAGCATGGAGCAATGATAAACTAAGGTCTTCTGAACATAGAGTTGTTTTGAAGCAGCCAGTGAACAGATTTTCCTTGGCTTTCTTTTGGTGCTTTGAGGATGAGAAGGTGGTCATGGCACCTGATGAAGTTGTTGGAGAAGTAAACAAGAGGATGTACAATCCATTTGTGTGCTCAGAATACTTGAAATTCAGAGAGAACAATCAAAAAGGAAGGTTTGAAAAGGTGGGGTATACAGTTAAGGATTTTGCTGGAATCAGGTCTCAACTGTAA 960 0.4073 MSKSEYVVELPILDISQPLQPSSLTSLSKACKDWGFFHIINHGISKDLCSQIHYLSKYLFSLPSEAKLKLGPFSSVKSYTPHFIASPFFESLRINGPNFYASAKSSEDILFDKQSSKFSETLQEYCSKMADLSEKILKLVLMSLEDGFDNLFYDSEFKKCHGYLRINNYSAPESLEDQVEGLGMHTDMSCITILYQDEIGGLQVKSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPVNRFSLAFFWCFEDEKVVMAPDEVVGEVNKRMYNPFVCSEYLKFRENNQKGRFEKVGYTVKDFAGIRSQL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00115 319 FunFam Gibberellin 20-oxidase-like protein 2 293 - -
Lapu10g00115 319 Gene3D - 2 293 IPR027443 -
Lapu10g00115 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Lapu10g00115 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 262 IPR005123 -
Lapu10g00115 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 292 - -
Lapu10g00115 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 79 IPR026992 -
Lapu10g00115 319 SUPERFAMILY Clavaminate synthase-like 7 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00115 Lapu-Chr10 2816192 2817304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00115 8 290 Glycosyltransferase AT5G59530 29.333 1.02e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00115 - - gmx:100782766 609.757