Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00114 ATGTCATTTTTGTGTGGGCTTCCTTTCCTTGAGTGTGTTTATTGTCTGGCCTGTGCACGATGGGCTTGGAAAAAATGTCTATACACTGCAGGCTATGAGAGTGAAAATTGGGGACTGGCTACTGCACAAGAATTTGAGCCTGTTCCTCGGATCTGTCGGTTAATCTTAGCCGTCTATGAAGATGATATTCGTAATCCTCAATGGGCTCCCCAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTGCGGAAGGACTATGGCGATAACCAAGGCTGTGTTACTCCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTGGCTGTTAGTGGACTCAATTTAGCGAAGGAAAGTGATTATGTTGTTTTGCTTGATAATAAGCTGGGACAGGCTGAATTTCATGGTGGTTATGTTCATAATGGGTTGTTGAAAGCAGCTGGATGGGTTTTTGATGCAGAATATGAGGTTCTCAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACTGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTGGCAGTTCATAATCGAGACAAGTTGGGTATACCGAGAAACAAGATAAGATGCTTTGCAATAGCTTCTCCTCGCTGCATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTCCTTCAGGATGATTTTTTGCCACGGACAACTGCTGCTCTAGAAGTTGTCTTCAAATCACTTTTATGTTGGCCTTGTTTATTATGTATAATGTGCTTAAAGGATACATGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTCTGTATGCACCTGGTCGGCTCTATCACATTGTGGAGCGAAAACCCTTTAGGATAGGAAGATTTCCACCTGTTGTTAGGACAGCAGTACCTGTTGACGGGAGGTTCGAGCATTTGGTTCTTTCTTGCAATGCAACTTCTGATCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCTCTCAGTTTAATGCGAGATAAAGACGAGCATATGGAAATTCCATCAAAGCAGAGGATGGAGAGGCATGAATCCATAGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCACAAGCATACTCCCCTTCATCATACGGAACATTTCATGAAATTGATGTTGGAGAGGATTCTGGAAGATCAAGTCAAGGTTCTTCCTTGTCTCATAAGAAACGAACACAAAGTTGGAATGAATTTGTTGGACGTTTGTTTGATGTGGATGATTCAGGTCATATGGTATTCAAAAAGACACCTCCATGA 1344 0.4286 MSFLCGLPFLECVYCLACARWAWKKCLYTAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPQGGYGINPDWVILRKDYGDNQGCVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEVVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRIGRFPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALSLMRDKDEHMEIPSKQRMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHEIDVGEDSGRSSQGSSLSHKKRTQSWNEFVGRLFDVDDSGHMVFKKTPP* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00114 447 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Lapu10g00114 447 Pfam Lipase (class 3) 116 242 IPR002921 GO:0006629
Lapu10g00114 447 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
Lapu10g00114 447 SUPERFAMILY alpha/beta-Hydrolases 44 249 IPR029058 -
Lapu10g00114 447 CDD Lipase_3 44 240 - -
Lapu10g00114 447 Gene3D alpha/beta hydrolase 39 253 IPR029058 -
Lapu10g00114 447 MobiDBLite consensus disorder prediction 400 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00114 Lapu-Chr10 2802422 2813100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00114 1 445 Miscellaneous Gene Families AT3G49050 61.734 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00114 - - gmx:100800227 860.136