Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00077 ATGGGGAGTGAGAAAGGAGGAAGTTTGTGTGCGTCCCCATGGCTGAAAATCTCGAAGGAGGTTGACCCCGCAGGTGCTTCCAAGGCCTTGCGCTTCGTTGATAATATGGGAGCTTCCACCGCCGTTCCCCCTAACTGGAACGGGCGTGGCACCTATGACTCCTTCTTTCGGAACTTCATGAAAATCCATCACATCCAACCTGGGCGAATTTCTATCTCCATTCTCGCCAAACCACCCATCTGTAATGGCTTTGGAACTCTGCATGGAGGTTCTGTTGGGACTTTGGCTCAGATTCTGTCAACTGCTTGTGCTAGAACGGTAGTTGCTGAGGACAAGGAACTTTTTCTTGGAGAAATTAGCATTTCTTACATGTCTGCAACTCCAGCAAATGAAGAAGTGTTAGCCAATGCCTATGTAGTGAAGAGCGGAAGAAATTTGACTGTAGTAGCAGTTGAATTCAAATTGAAGAAATCTGGGAACGTGGCCTATAATACACGTGCTACCTTCTATAACATGCCACTTTCCAGTTTATGA 534 0.4663 MGSEKGGSLCASPWLKISKEVDPAGASKALRFVDNMGASTAVPPNWNGRGTYDSFFRNFMKIHHIQPGRISISILAKPPICNGFGTLHGGSVGTLAQILSTACARTVVAEDKELFLGEISISYMSATPANEEVLANAYVVKSGRNLTVVAVEFKLKKSGNVAYNTRATFYNMPLSSL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00077 177 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 60 174 IPR029069 -
Lapu10g00077 177 CDD PaaI_thioesterase 60 170 - -
Lapu10g00077 177 Gene3D Hotdog Thioesterase 45 173 - -
Lapu10g00077 177 Pfam Thioesterase superfamily 84 159 IPR006683 -
Lapu10g00077 177 NCBIfam hotdog fold thioesterase 60 157 IPR003736 -
Lapu10g00077 177 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 28 174 IPR039298 GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00077 Lapu-Chr10 2338966 2341812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00077 K17362 - gmx:100499764 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00077 10 2338966 2341812 Lapu10g00077 10 2338966 2341812 ECH