Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00073 ATGGAGGCAAAACAGCTCAAACGCACCTTGGAGATCACGGTTGTGTTGGGAGAAAACATAAGTGTGGATCGAAAATTAGTGACCGAAAACGTGTATGTTGTTGCTCGTGCTGAATCTTTGAATTGTTGCACAACCAAAATGGTGAATGGAGATGATGGAGTGCATGCATGGAATGAGAAATTTCTGTTAGAGGTTCCTTCATATGCAAGATCTGTTACGTTTGAGGTGCAATGCAAGAAATATAAAGAACTTCGTCCTATTGGGGTAGCAAGAATTGCTCTTTCGGATTTACTCAGTGACAAAAATAATAATGTTTTGTCCGAAAGCGTGCCTCAAATGTTTTGTTACGGTTTAAGGAACTGGGAGGGTCAACGAAACGGAGTTATTCATTTCTCAGTGAAGGTGGTGGATAATTTGTCTTCAGAAACAAAACAAGATAAAGACACAAAGATGGTGAATTCTAGAGGAATCGGGAATGATGTTTTAGGGTTTCATGTTGAACCTAAGAAATCAAATGATGTTGTCATTGGTATTCCTCTTAATTGTGTTTAG 552 0.3877 MEAKQLKRTLEITVVLGENISVDRKLVTENVYVVARAESLNCCTTKMVNGDDGVHAWNEKFLLEVPSYARSVTFEVQCKKYKELRPIGVARIALSDLLSDKNNNVLSESVPQMFCYGLRNWEGQRNGVIHFSVKVVDNLSSETKQDKDTKMVNSRGIGNDVLGFHVEPKKSNDVVIGIPLNCV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00073 183 Gene3D C2 domain 7 136 IPR035892 -
Lapu10g00073 183 PANTHER INGRESSION PROTEIN FIC1 8 144 - -
Lapu10g00073 183 SMART C2_3c 9 106 IPR000008 -
Lapu10g00073 183 Pfam C2 domain 9 103 IPR000008 -
Lapu10g00073 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00073 Lapu-Chr10 2296871 2297729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00073 - - gmx:100810274 255.758