Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00067 TGTACAATACACTCTTTTGGGTTTCTTACAGAGATCCACCCGCTCATGGCCTCGCCGGACGCCGTCGCAGCCTTCAGGCGCATAACCGGAGCACCGGAGTTCGTCGCCGTCCAGAAATTAGAGGAATATGGTGGCAATCTAAATGAGGCTATTAATGCCCATTTTCTTGAAGGGGATAGGCACATATTATCAGGTCAAGGGCAAAATCTTGCTGCTGCCCCACTACATAATAACATTGTTGCAAGTAATCAAAACCGTGGTGAAGGATCAAATGGAATTTTGCCTTTTCTCAACGCAGCTAGAAGATTTCGACCTTCACTTTTACTTGACCCAAATTATAGAAGAGAACTTAGAGATCTATATAAGGGGATTGGTGGTGGCGCTACTGCATATACGAATCGCCCACCGCCTCTTACTTCCCATCCGGCTGAGGTGAGGGAAGTTCCTGCATGGATCAACAATCCATTTGAGCCGCATTATCAATCAGGATTGAGCACTTCAGGTGAAGATTTATCTTCTCATGGTTTAGGAATTCGTGGGACAGATGGTTATCAGAACCAATACCCTTTAGCTCAGTCAAATGCCTCACACGTTCCCGATACTGAAACAGAGGAAGCTATGCTTCAGGCAGCTATGGAGGCCTCGAGAATGGAGAGGAGAGGAGGTTCTTCATGGGAGCGAGTTGATGATCTCAATCATTCTTCTGGTGGTGGGCTTCCTCAAACTCTTGTTCAACAAGAAGATGATGATTTGGCCCGTGCAATTGCGTCATCCTTAGAGACAGCACAGCAAGAGAAAACCACTCGGGAGCTTTTCGAACAAGAGGAAAAGGAAGGGCAGCTTAGAGTTCACGATTTATTAGACAAGGGAAAGAAAACTAGCAATAGCAGAAACCAATTAGAGTGGGGTGGTATTTCTTCTGAAGAGATTAATGAAGCATTGTTAGTTGAAAGTGCACTTTTTGGTGAAATTTCCGCTCACAGCTCTCACAGTTTTTCATCCTTGCCTAATCTGCAACATCGTCCAAAAGAAAATATGGATTCCAAGGCGCAGTGCGTATCCACTTCTCCGTCACAATCATTAATTAACTCTCGGTTGCTGAAACAACAACAGGATGCTGACTATCTTGCGTCACTACAAGCTGATAAACAAAAGGAACTGAATTCTTTCTATAAAACTGAAAGCCATTCCTCACAGGAACAAGAATCAGGCAAAACGATGATTGAGAAAAAGGAATTGGTGAAGATACATGACAAGAAAGAACTTGGGCTTTCCAAGGAACCACTGTTGTCTGAGGAAGTAATTACTATTGTTGTTCGAATGCCAGATGGAGGTCGCTGTGAACGTCGCTTTCTCAAAACTGACAAACTAGAGCTTCTCTTTGAGTTCATAGACGTATGTGGAGCACAGAAGCCTGGAACCTATAGATTTGTAAAGTCATACCCTCGCCGTGCTTACAGCATTAACGATTGCTCGTCAACCTTCAATGAAGTAGGTCTTAACAAAAGTAATGAAGCTTTGTTTCTGGAGTTGATTTAG 1539 0.4373 CTIHSFGFLTEIHPLMASPDAVAAFRRITGAPEFVAVQKLEEYGGNLNEAINAHFLEGDRHILSGQGQNLAAAPLHNNIVASNQNRGEGSNGILPFLNAARRFRPSLLLDPNYRRELRDLYKGIGGGATAYTNRPPPLTSHPAEVREVPAWINNPFEPHYQSGLSTSGEDLSSHGLGIRGTDGYQNQYPLAQSNASHVPDTETEEAMLQAAMEASRMERRGGSSWERVDDLNHSSGGGLPQTLVQQEDDDLARAIASSLETAQQEKTTRELFEQEEKEGQLRVHDLLDKGKKTSNSRNQLEWGGISSEEINEALLVESALFGEISAHSSHSFSSLPNLQHRPKENMDSKAQCVSTSPSQSLINSRLLKQQQDADYLASLQADKQKELNSFYKTESHSSQEQESGKTMIEKKELVKIHDKKELGLSKEPLLSEEVITIVVRMPDGGRCERRFLKTDKLELLFEFIDVCGAQKPGTYRFVKSYPRRAYSINDCSSTFNEVGLNKSNEALFLELI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00067 512 MobiDBLite consensus disorder prediction 329 349 - -
Lapu10g00067 512 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 246 265 IPR003903 -
Lapu10g00067 512 Pfam UBX domain 432 510 IPR001012 GO:0005515
Lapu10g00067 512 MobiDBLite consensus disorder prediction 266 295 - -
Lapu10g00067 512 CDD UBA_Ubx1_like 19 55 - -
Lapu10g00067 512 SMART ubx_3 426 511 IPR001012 GO:0005515
Lapu10g00067 512 PANTHER FAS-ASSOCIATED PROTEIN 25 511 - -
Lapu10g00067 512 MobiDBLite consensus disorder prediction 261 297 - -
Lapu10g00067 512 Pfam UBA-like domain 20 59 - -
Lapu10g00067 512 ProSiteProfiles UBX domain profile. 430 508 IPR001012 GO:0005515
Lapu10g00067 512 Gene3D - 431 511 - -
Lapu10g00067 512 SMART uim 203 222 IPR003903 -
Lapu10g00067 512 SMART uim 246 265 IPR003903 -
Lapu10g00067 512 SUPERFAMILY Ubiquitin-like 427 506 IPR029071 -
Lapu10g00067 512 CDD UBX 436 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00067 Lapu-Chr10 2130017 2143159 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00067 - K18726 gmx:100795740 759.985