Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00063 ATGGGTGGTAGTTTTTCCTCTTGTGTTTGTGATGGGGATGCTACCCCTTTGAGGCCAAGGCTTGGGGATTTACCCGAGAGCTGTGTGGCATTGATGTTGTTGTATTTGGACCCACCAGATATTTGCAAGCTTGCACGATTAAACAGGGCATTTCGTGATGCTTCGTTAGCTGATTTCATTTGGGAATCGAAGTTGCCTTTGAATTATAAGTTCATCGTGGAGAAAGCTTTGAAGGATGCTTCTGTAGCAGAATTGGGGAAGAGGGATATCTATGCTAGACTCTGCAGGCCTAATTTGGTTGACAACGGGACCAAGGAAATTTGGCTAGATAAGAGGACGGGTGGGTTGTGTTTTGCAATTTCTTCCAAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATACTGGAGTCGCATTTCGACAGAAGAGTCAAGATTCCACACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATGTTGATTTTCAATTTCCACCTGGGACATACAGTGTGTTCTTCAGACTCCAGCTTGGCCGATCTTCCAAGAGATTAGGTCGTCGAGTTTGTAAGACTGATCACATTCATGGGTGGGATATAAAACCTGTGAAATTTCAGCTAACAACTTCTGATGGTCAACATGCTGTATCCAAAACTCATTTGGATAACCATGGTCACTGGGTGCTCTACCACGCAGGAAACTTTGTTTCTAAGAATTCTAATGATCTGATGAAGGTCAAATTTTCATTGGCTCAGATCGATTGCACGCATACCAAAGGTGGTTTGTGTGTAGATTCTGTTTTTATATGTAATAGTGATGTAAAACAAGAGGTGTAG 846 0.4267 MGGSFSSCVCDGDATPLRPRLGDLPESCVALMLLYLDPPDICKLARLNRAFRDASLADFIWESKLPLNYKFIVEKALKDASVAELGKRDIYARLCRPNLVDNGTKEIWLDKRTGGLCFAISSKALRITGIDDRRYWSRISTEESRFHTVAYLQQIWWLEVEGDVDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKTDHIHGWDIKPVKFQLTTSDGQHAVSKTHLDNHGHWVLYHAGNFVSKNSNDLMKVKFSLAQIDCTHTKGGLCVDSVFICNSDVKQEV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00063 281 Pfam Phloem protein 2 117 272 IPR025886 -
Lapu10g00063 281 SUPERFAMILY F-box domain 18 75 IPR036047 GO:0005515
Lapu10g00063 281 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Lapu10g00063 281 PANTHER F-BOX PROTEIN PP2-A15 10 279 - -
Lapu10g00063 281 CDD F-box_AtSKIP3-like 21 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00063 Lapu-Chr10 2073814 2077093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00063 - - gmx:100814033 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00063 10 2073814 2077093 Lapu10g00063 10 2073814 2077093 ECH