Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00021 ATGATTCTCTCCAAAATGGGCTCAGAAATCGAGAATCCAACAAACACCCAACAACCTCATAACCAACACAATCCTAGTATCTCTTCAACCCAAAATCACGCTAACGGTTACGAATTGGTTAGCAATAATAACAACAAAATTGAAACCACTTACCGTTGTGGCGGTGACGATGCCCACGGTCACAGCCAGGTAATGTTAGTCCACCCTCACGCCCTCCTTCCCATGCCAGTCCCGCCGCAGACTTTCCAATCAAACCAAAACGACGTCGCTCTGCCTAGCTTCTCTGTCGGAAGCTTCCTCCGCCAGCGGAGCAGCGACCTCTCCGCCGCGATTGTGAAGCGCGTCTCCTCGCTCCGCCAGTCCATGGAAGAGGACAACGAAGGAGACGGTGACGGCGAGAAACGCGAAGTGACGGAGTTCAACCTCTCCGGTGTGAAGGTCGTTGTGACGGCGAAGCCCGAGGAGGAGGAAGAGACGTCGTTGAGAGGACGCATCAGCTTCTTCTCTCGGTCTGATTGCAGAGACTGCACTGCGGTGCGGAGGTTCTTCAGGGAGAAAGGACTGATGTTCGTGGAGATTAACGTGGACGTTTTCGTCGAGAGGGAGAGGGAGCTGCGCGACAGGACGGGGACCGGTTCGGTGCCGCAGATTTTCTTCAACGATAAGCTGATCGGAGGGCTTGTGGCGCTGAACTCGCTGCGGAACAGCGGGGAGTTCGACCGGAGAGTGGCGGAGATGCTCGGCGGGAAGGAGGCCGATGGAAACGCGCCGTGGCCGCCGGCGTACGGGTTCGATTGCCCGGAGGAGAGTCGCGCGGACGAGATGGTTGGAGTGGTTAGGGTTCTGCGGCTGAGGTTGCCGATTCAAGACCGGTTGCGGAGGATGAAGATGGTTAAGAACTGCTTCGAAGGGAACGAGTTGGTGGAGGCGCTGATTCAGCACTTCCACTGCGCGCGTAGCGAGGCCGTTGAAATCGGACAACAATTATCCACGAAGCACTTCATCCATCATGTTTTCGGGGAAAATGATTTTGAGGAGGGAAATCACTTATATCGTTTCCTTGAGCATGAACCTTTTATCCCCAGATGTTTTAATTTTCGTGGTACCACAAATGATAGCGAACCAAAGACTGCAGCTGCAATATGCACTAGGCTTGCCAAGATTATGTCTGCCATTCTTGAGTCTTACGCTTCTGATAATAGGAAACACGTTGATTATGAGGCCATTAGCAAAAGCGAAGAATTTCGTAGGTACGTAAATATGACTCAGGATCTGCAGCGAGTGAATCTCTTGGAACTATCAGAAAACGAGAAACTTGCATTCTTCTTAAATTTATATAATGCAATGGTCATCCATGCTGTTATTAGCGTAGGGTGTCCAGAAGGTGTAATTGATAGGAGATCCTTCTTCAGTGATTTCCAGTATCTGGTTGGAGGGCATCCTTATTCTCTTAACAGCATTAAAAATGGTATCCTCAGATGCAATCGTAGGTCACCGTATTCCCTAGTAAAGTCCTTTAGCACAGGAGACAAGCGGTTAGAGGTTGCTCTGGTCAAGTTGAATCCGTTATTGCACTTTGGACTTTGTAATGGTACAAAATCCAGCCCAAAAGTTAGATTCTTCTCACCACATAGAGTTGTAGACGAGTTGAGAGGTGCTGGAAGAGAGTTCTTTGAGAATGAAGGAATTGAAGTGGACCTGGAGAAGAGAACAGTTTATCTAAATCGGATTTTCAAATGGTTCAGTGGAGATTTTGGACAAGAGAAAGAAATATTGAAGTGGATACTTAATTACTTGGATCCAAATAAAGCCGGTCTAGTGACACATCTCTTGGGAGATAGTGGACCAGTTCATATCTCTTACCAGAATTTTGATTGGTCAATAAATTCTTGA 1893 0.4855 MILSKMGSEIENPTNTQQPHNQHNPSISSTQNHANGYELVSNNNNKIETTYRCGGDDAHGHSQVMLVHPHALLPMPVPPQTFQSNQNDVALPSFSVGSFLRQRSSDLSAAIVKRVSSLRQSMEEDNEGDGDGEKREVTEFNLSGVKVVVTAKPEEEEETSLRGRISFFSRSDCRDCTAVRRFFREKGLMFVEINVDVFVERERELRDRTGTGSVPQIFFNDKLIGGLVALNSLRNSGEFDRRVAEMLGGKEADGNAPWPPAYGFDCPEESRADEMVGVVRVLRLRLPIQDRLRRMKMVKNCFEGNELVEALIQHFHCARSEAVEIGQQLSTKHFIHHVFGENDFEEGNHLYRFLEHEPFIPRCFNFRGTTNDSEPKTAAAICTRLAKIMSAILESYASDNRKHVDYEAISKSEEFRRYVNMTQDLQRVNLLELSENEKLAFFLNLYNAMVIHAVISVGCPEGVIDRRSFFSDFQYLVGGHPYSLNSIKNGILRCNRRSPYSLVKSFSTGDKRLEVALVKLNPLLHFGLCNGTKSSPKVRFFSPHRVVDELRGAGREFFENEGIEVDLEKRTVYLNRIFKWFSGDFGQEKEILKWILNYLDPNKAGLVTHLLGDSGPVHISYQNFDWSINS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00021 630 SUPERFAMILY "Winged helix" DNA-binding domain 272 374 IPR036390 -
Lapu10g00021 630 ProSiteProfiles Glutaredoxin domain profile. 153 250 - -
Lapu10g00021 630 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 286 353 IPR000591 GO:0035556
Lapu10g00021 630 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 28 629 - -
Lapu10g00021 630 Gene3D - 270 413 IPR036388 -
Lapu10g00021 630 MobiDBLite consensus disorder prediction 8 33 - -
Lapu10g00021 630 SUPERFAMILY Thioredoxin-like 163 244 IPR036249 -
Lapu10g00021 630 SMART DEP_3 282 355 IPR000591 GO:0035556
Lapu10g00021 630 Pfam Glutaredoxin 167 224 IPR002109 -
Lapu10g00021 630 Pfam Protein of unknown function, DUF547 432 557 IPR006869 -
Lapu10g00021 630 CDD DEP 274 352 - -
Lapu10g00021 630 MobiDBLite consensus disorder prediction 1 33 - -
Lapu10g00021 630 Gene3D Glutaredoxin 162 246 - -
Lapu10g00021 630 ProSiteProfiles DEP domain profile. 282 355 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00021 Lapu-Chr10 1209063 1214303 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00021 - - gmx:100810111 1022.31