Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1101 ATGCATGCGTTATTACGTATTGGAGCCATTACATTCCGACCAGACAAGTTTCAAGGAGACATAGATAGAGAGAAGAGGTTCATTATGAAGACTCGTAGTTCTTCCAAAATCTCTGCTAAATGGGTTCCCATTTTCTCTCTTCTTTCCTTCCTTCTTGGAATGCTCTTCACAATCAGGATGTGGGAACCACCTGCATTCAACAGTGTATTGCTTTCAAAACATGGGCATGAACAAAAGTTGCAAATGGTCTCAGAGGACTGTGATACTAAAAAGCAACCTATGCTGGATAAGGATGTAATGGATGGACTATACAAAACCCATGAATCCATTCAATCCCTAGACAATCAAATTTCCGTGTTCCAGAAGGAACTAGCAGCATCTAGGAGTCCACATGAACCAGGGATCCTGAATCATTCTGGTTCCACCTTGAGCTCTGGGCTCTCTCCTAGAGACCCTTATAGGAAGAAGGTGTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGCAGGATGCGGCGTGATTCGGTTAGAGCAACATGGATGCCTCAAGGGGAAAAACTTCTTCAATTGGAACGTGAGAAGGGAATTGTCATCAGATTCATGATTGGTCACAGTACAACATCCAACAGTATTCTAGATCAAACTATTGATTTAGAAGAAGCCCAACACAAAGACTTTCTTCGCCTGGAACATGTTGAAGGGTATCATGAACTGTCTGCAAAAACAAAAATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTTTATGTTAAAGTGGATGATGATGTCCATGTCAATTTAGGTGCACTGGCTGCAACCCTTGCCCGTCGTCGTTCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCTCAAAAGGATGTTAAGTATCATGAACCTGAGTTTTGGAAGTTTGGAGAACAAGGGAACAAATACTTCCTACATGCAACTGGGCAGATATATGCTATCTCTAAGGATCTGGCTACATACATTTCCATTAACCAGCCAATATTGCACAGATATGCTAATGAAGATGTCTCACTTGGTGCATGGTTCATTGGTCTGGAAGTTGAGCATATTGACGACCGCAGTATGTGCTGTGGTACTCCTCCAGATTGTGAGTGGAAGGCACAAGCAGGTAACGTATGTGTTGCATCATTTGATTGGAGTTGCAGTGGAATCTGCATGGCAGTAGAAAATATTAAATATGTCCACTCAAAGTGTGGTGAAGGGGATGAAGCTGTTTGGAGTTATGTACTGTAG 1281 0.4192 MHALLRIGAITFRPDKFQGDIDREKRFIMKTRSSSKISAKWVPIFSLLSFLLGMLFTIRMWEPPAFNSVLLSKHGHEQKLQMVSEDCDTKKQPMLDKDVMDGLYKTHESIQSLDNQISVFQKELAASRSPHEPGILNHSGSTLSSGLSPRDPYRKKVFIVIGINTAFSSRMRRDSVRATWMPQGEKLLQLEREKGIVIRFMIGHSTTSNSILDQTIDLEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGALAATLARRRSKPRVYIGCMKSGPVLSQKDVKYHEPEFWKFGEQGNKYFLHATGQIYAISKDLATYISINQPILHRYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNVCVASFDWSCSGICMAVENIKYVHSKCGEGDEAVWSYVL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1101 426 Gene3D - 147 372 - -
Lan9g1101 426 Pfam Domain of unknown function (DUF4094) 38 129 IPR025298 -
Lan9g1101 426 Pfam Galactosyltransferase 171 368 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan9g1101 426 PANTHER HEXOSYLTRANSFERASE 36 418 - -
Lan9g1101 426 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 36 418 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1101 Lan-Chr9 18395652 18399077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1101 29 426 Glycosyltransferase AT1G77810 69.000 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1101 K20855 - gmx:100804402 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0492 11 3804881 3808089 Lan9g1101 9 18395652 18399077 LSH
Lan9g1101 9 18395652 18399077 Lan14g0631 14 13251209 13255354 PCT
Lan14g0631 14 13251209 13255354 Lan9g1101 9 18395652 18399077 PCT