Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1043 ATGGAATCAACAGTGGAGAAGGTGCAGAGTTGTGCTGTTGAAGATGGAGTTGACTTGAAATTCTGTCACATGCAGAAGTTCAAGCTCTATGAGACTTGTTCGAGGTTTTATCTTATTGGAAGAAACAAAAGTAGAACACTGTGGAGGGTATTAAAGATTGATAGATCAGAGCCTTCGGAACTAAATATCACTGAAGATTCAACAGTCTACTCAGAAACTGAGTGTTATGACCTTCTGAGGAGAATACATGAAGGAAACAAACCCACAGGGGGACTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATACTACATGCTGCTTGTAACAAAACGGAGGAAGATCGGCACAATCTGTGGGCACACTATATATGCTATCGCAAAGAGTGAAGTGGTTCCAATTCCACATGCTACTGTGCGATCCAAAATGGCATATTCTAAGGATGAGAAAAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACAAAGGACTTCTTTTTCAGCTACTCATATAATATCATGCTTAGCCTTCAGAAGAACTTATCTGATCATAATATGATGGGAAAGTCACTTTATGAAACAATGTTTGTTTGGAATGAGTTTTTGACTCGTGAAATCCGGAATGATCTCCAGAATACTTTCTGGACAGTTGCCTTAGTGCATGGGTTTTTTAAGCAGGCCAATCTTTCTATATCTGACAGGGAGATCAACTTGACTATCATAGCTAGGCGCTCAAGGCATTATGCAGGGACCAGATATTTGAAAAGAGGCGTGAATGAAAAGGGTCGAGTAGCTAATGATGTTGAGACTGAGCAGATAGTCTTTACAGATGCTCATGATGGATGCCCGATGCAAATAAGTTCCGTGGTACAGATACGGGGTTCGATCCCTTTGTTCTGGTCTCAGGAAGCCTCTCCGTTGAATTTAAAACCCGGCATAATATTATCAAAGAAGGACCAGAACTTTGAAGCTACAAGACTTCATTTTGATAATCTTGTCAACAGATATGGAAATCCAATTATTATATTGAACTTGATTAAGACATTTGAGAAGAAGCCCCGAGAAACTATTCTGCGAGCTGAGTATGCAAATGCTGTTAGGTCTATCAACAACAGTTTGAGAGGGGAAAATCGCCTGTGGTTCCTTCATTGGGATCTGCATTGGCACTCAAGACGCAGAAAAGCTACAAATGTGTTGTCACAACTGGGGAAAGTGGCTGCATATGCATTGAAGCGAACTGGCATTTTCTACTGTCCAGTGACACCGAATTTGAGGGCAGAGGGTTTGTTCCGTGATTCCTACTCTGAGAATAACAGTGCCGTCGACCACACCATCGCAGAACAAGCTAGTATGAACAAGGATAATGTTGATAACGAAACAGAAGTTAGCGATTGTTACTATAGTGGTGATGAGAACAAAGATTACAGTGTCAAGCCCCAGATGCTTCAAGCAGGAGTCTTGAGGACTAATTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGTTTATGGACTAGCTGCACTTGAACGTCAGCTGCAAGTTTTAGGGTTTTCTGAATCCTCGTATATTTATCTTGATCACCCTTTGGCAAAGGAATTAATGACAATGTATGAGTCCATGGGTGACACACTAGCCTTTCAATATGGGGGTTCGGCAGCGCACAATAAGATATTTTCTCAGAAAAGAGGTCAGTGGAAGGCAACCACGCAGTCTCAGGAATTCATCCGAACTCTGCAGCGCTACTATAACAACACATATGCTGATGGAAATAAACAGAATGCGATTAACATATTCTTGGGACATTTTCAACCGCAACAAGGGAAACCAGCATTGTGGGAGCTGGACTCAGATCAGCACCACACTATCGGGAAAGGTGGGCTATATTTAGAAGATGACAATGTCAGGTCAAATAATAAAAGATCACTATCAGCTGGCAACATTCTCTATGAAAGTGGCAATACAGTTACGAAGTTGAGTGTTACGAATTTTCAGCCTTATTCTGAAAAAAATGATAACTGTCGTCCTTCAGAGTCTACTCCAGACATTGTTACTTGTGGAAGTGAGATTTGTCATTGCAGGAAAATACGCAGGGGAATGTTCAAGGACCAACATTGTGACAGTGATTACGTTTGTCATGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTAATGTGGATTGGCTTTCTTCTTCTGGAAATTCATGTGAAGAGGAATTGCTTGAAAGGTTAACCAGCATCTCCTCTGAGAATATTGTGAATGAACAAATAGCTGAGACAATTCCATCAGCGAGTAAATCTGGATCCAGCATGAAGAAGCAGAGTGGAGCTGAGCTCAAAAAAGGTGCTGAGTATGCTGAAAGCTTTGAACGTTGGGTTCTCGGGGAGACGTTTTTTGTTTGA 2433 0.4106 MESTVEKVQSCAVEDGVDLKFCHMQKFKLYETCSRFYLIGRNKSRTLWRVLKIDRSEPSELNITEDSTVYSETECYDLLRRIHEGNKPTGGLKFVTTCYGIIGFIKFLEPYYMLLVTKRRKIGTICGHTIYAIAKSEVVPIPHATVRSKMAYSKDEKRYKKLLCSVDLTKDFFFSYSYNIMLSLQKNLSDHNMMGKSLYETMFVWNEFLTREIRNDLQNTFWTVALVHGFFKQANLSISDREINLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTDAHDGCPMQISSVVQIRGSIPLFWSQEASPLNLKPGIILSKKDQNFEATRLHFDNLVNRYGNPIIILNLIKTFEKKPRETILRAEYANAVRSINNSLRGENRLWFLHWDLHWHSRRRKATNVLSQLGKVAAYALKRTGIFYCPVTPNLRAEGLFRDSYSENNSAVDHTIAEQASMNKDNVDNETEVSDCYYSGDENKDYSVKPQMLQAGVLRTNCIDCLDRTNVAQYVYGLAALERQLQVLGFSESSYIYLDHPLAKELMTMYESMGDTLAFQYGGSAAHNKIFSQKRGQWKATTQSQEFIRTLQRYYNNTYADGNKQNAINIFLGHFQPQQGKPALWELDSDQHHTIGKGGLYLEDDNVRSNNKRSLSAGNILYESGNTVTKLSVTNFQPYSEKNDNCRPSESTPDIVTCGSEICHCRKIRRGMFKDQHCDSDYVCHDEHGDACDCSNFLNVDWLSSSGNSCEEELLERLTSISSENIVNEQIAETIPSASKSGSSMKKQSGAELKKGAEYAESFERWVLGETFFV* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1043 810 ProSiteProfiles Sac phosphatase domain profile. 163 559 IPR002013 GO:0016791
Lan9g1043 810 Pfam SacI homology domain 99 397 IPR002013 GO:0016791
Lan9g1043 810 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 9 808 - -
Lan9g1043 810 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 9 808 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1043 Lan-Chr9 17658625 17667488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1043 24 803 Acyl Lipid Metabolism Gene Families AT5G20840 54.691 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1043 K22913 - gmx:100806380 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0576 11 4580477 4589365 Lan9g1043 9 17658625 17667488 LSH
Lan9g1043 9 17658625 17667488 Lan2g0325 2 2874176 2882842 LSH