Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1035 ATGGATGCACTAGACAAAGCTTTTTCTGACCTTGTTGGCACCATCAAATCATGGATTCCCTGGAGATCCGAGCCAACAAATGTGTCCAGGGATTTTTGGATGCCTGACAACAGTTGTAGAGTATGCTATGAGTGTGATTCCCATTTCACCATATTTAATCGTAGACACCATTGTCGTCTTTGTGGACGAATTTTCTGTGCCAACTGTACAACAAACTCAATTCCTGCCTCATTTAGCAGCGAAAGGAACTCCTGGGATGAGCTGGAGAAGATTCGTGTATGCAATTATTGTTACAAGCAATGGGAGCTGGGCATAGTTGCTCATGATAACAGTATCCAGCCTTCCGATCTGGATCGTTGTGATTCAATGTCAATTTCAAGTGTGGCTAGCAGTAAAAGCAGTGGCATTGCTAACAGTAGTAACATGACTCTGTTCTCCTTGCCTTATTCAGTTGGGTCTTATCAACAAATGCAACAAGATTCCTCTCTGGACTTGTACCAATCGCCTATGAGTGGAATAGGCAGCGAGGGAGAGAGTTTATCAGTATCAGGAGGGACAGATAATCTTGTAGCAGACCTCGGGAATCCATTATCAAAGCAATATGGATTTTCAATTAACAGGAGTGACGATGATGAGGATGAGCATGGTATATATCGATCAGATTCTGATTTGAGGCATTATGCTCCGGAGAATAGCTACTTTGAGCAGGCTAAGTTTGATGGGGTAAACAACACTGATGGCTCACAGAAAGCGCGTCCTGATGGAGAAAACATCAGTGCGAAGTTCTCTTCAAAACACAGTTTTGATGCCCAGGGTTTGGAAGGAGCCCCAATTGTTGGAAAAAACGAAGACGAACCTGATACCTATGATGAAAATGAAGCACCTTCCTCATTATATGTTTCAGAGGATGTCGATCTTGAACCTGTTGATTTCGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAGGATGAGCGGGAAGCTACTTTGTTCGATGATGATGAGGATGATAATGATGTGAATACTGTTGGAGAGTGGGGGTATCTGCGCAATTCAAGCAGTTTTGGAAGTGGAGAGCATCACCTAAGAGAAAGGTCTAGCGAGGAGCAGAAGAAGGTAATGAAAAATGTAGTTGACGGGCACTTCAGAGCATTGGTAACTCAGCTGTTACAGGTCGAGAACCTACCTGTCGAAGACAATGACAAAAACAGTTGGTTGGAGATAATCACGTCCCTGTCATGGGAAGCTGCTACTTTATTGAAGCCAGATATGAGCAAAGGTGGAGGGATGGACCCAGCTGGTTATGTGAAAATCAAATGCATAGCATCCGGGAGCCGTATTGAAAGTATGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACGTCAAAAGTTGATAAAGCTCGCATATTGATCCTTGGAGGGGCTCTTGAGTACCAGCGTGTTACCAACCTCCTGTCTAGTGTAGATACACTATTGCAGCAGGAAATGGACCATTTGAAGATGGCAGTGGCAAAGATAGCATCACACCATCCAAATATCCTTTTGGTAGAGAAATCAGTTTCTCGGTATGCACAAGAATATCTTCTAGCAAAAGAAATATCTCTGGTTCTCAATGTCAAGAGACCACTTCTGGAGCGCATAGCTCGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTGTCATCGCAAAAGTTAGGTTGCTGTGAAACATTTCACGTTGAAAAGTTCATTGAAGACCTAATTGGTGCTGGTCAGGGTGCGAAAAAAACAGTGAAAACATTGATGTTTTTTGAAGGCTGCCCAAAACCGTTGGGTTGCACAATTTTACTTAGAGGTGCTGATGCGGATGATCTGAAGAAGGTAAAGCACGTAGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCCATGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCCTTGCCAGAACTTCCATTAAACAGTTTAGCCCTTCCAAATAAATCATCATCCATCCAGAGGTCCATCTCAACAGTTCCTGGTTTCAGTGTTCCTGGCAATGAGAAGCCCCAGGAGCTTGAACCCGACACTGAACCACGGAGAACCAAAAGTGTTACAATTGCTGATCTGGCCTCATTAGCCAGCACTGCAGGACCCTGTGCACCCAATGATTTTTCTCAATCTATGCCACCTGGATCAAGTGTCAACCATTCGTACTATAAGAAGCCTCTTCCATTTAACAGTAAAGTAAAAGATGAAACGGACTCCAAACAACTTGTAGTGGAAGAAATTTCTGCAGTGGACAACACTCTGGCGGTCATGGATGATCCTACTGTAAGTGGAAAATTAGATCAACACATTTCAGCTGACACTCCTCAAAATGATAATAGCAAAGTTGATCAATTAAGTGGGTCTGAGATGCTATCTCCAGAAGATGTTCAAAAACATTCCGTGAAACCGGAAATAATAAATGAAGAGCCAGTTCCTCTAAAAGAAGAGTTTCCTCCATCACCCTCCGACCACCAAAGCATTTTGGTGTCGTTGTCCTCCCGATGCGTTTGGAAGGGAACTGTGTGTGAGAGGTCCCACCTATTTCGAATTAAATACTATGGCAGCTTTGACAAACCATTGGGTCGCTTTCTGCGTGACCATTTATTTGATCAGAGTTACCGGTGCCATTCTTGTGAAATGCCATCCGAAGCACATGTACATTGTTATACTCATCGACAGGGAACACTCACCATATCTGTCAAGAAAATACCAGAAATTCTCCTACCTGGTGAAAGGGATGGCAAGATTTGGATGTGGCATAGGTGCTTGCGGTGTCCAAGAATCAATGGGTTTCCTCCTGCTACACAGAGAATAGTAATGTCTGATGCTGCGTGGGGTTTATCCTTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCGAGCTGTGGCCATTCCTTACATAGAGACTGTCTTCGTTTTTATGGATTTGGGAAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCACACAAACTGGTATTTGATTATGAGGATCTGAACTGGATACAAAAAGAATCCAATGAGGTGGTTAGCCGGGCAGAGTTTTTATTCTCTGATGTACTCACTGGTCTTAGTCAAATTGGTGATAGAAGATCTATCGCTGTCCCAGTAAATAGTGGCCTTAAAACACCTGAATTAAGCCACCAAGTTGCTGAACTGGAGGGGATACTGCAAAAGGAGAAACTAGAATTTGAGGAATCCCTTCACAAGATTTTGAACCAAGAAAGGAGAAAGGGCCAACCTGGGATTGACATTTTAGAAATTAATCGATTGCGGAGGCAGTTACTTTTCCAATCCTACATGTGGGATCACCGCCTTATTTATGCAGCCAATTCCGGCAATGAAACCGATTTAAATAGTTCAATTCCAGATGATAAGGAGAGACATATAGATGAATATCAGACAAGTATGGCCTCCATGGAAGTAAAGGGCTTCAGTGGTGTCAATTCTATTCACGATGATCCAATGCTTAACAAAAGCCATAGTGTTGGAGCAGGACGAGGAGGAGGAGTTGATGGTGGAATTTCCCAATCTGATGCATCAAATCAAGAAATTGACATGGCCGAAAATAAAAATAATATGAAAGAAGATCCACCTAACCTTTCAATCAGAAAAAGCATAAGTGGTCAATCTGAGCTCTTTGAACCTGAATTGGGTGCTCATATAGCTCTCTCTGATGGGCCATTTCCTGTCATACCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAGACCACTCAGGATTAGGAATTCAAAAGGAGAACACTTCTGTAAATTCTGATACATTTATGGTTGATGCCTTGGCAAACACTGTACATAAAGAGGCATACAATCTTGGGGATCATGCAGAAGACCAGAATGGCCCCAAGGGTATCCATTCTGCTTCTAAGGGTCATGATAATATGGAAGACTCTTTAAGCTGGTTAGGAATGCCCTTCTTAAACTTCTATCGCCAATTTAATAAGAACTTTTTTGCTAGTACACAGAACATTGACACAATAGTTGATTACAATCCTGTTTATGTATCATCCTTCCGGAAGCTGGAACTCCAAGGTGGGGCAAGGCTACTTCTGCCAATTGGTGTTAATGACACTGTAATTCCAGTATATGATGACGAGCCTTCAAGTATTATAGCTTATGCCTTAACGTCACCAGAATATCATTTCCAATTGACTGATGATGGAGAGAGACCAAAAGATGGGATTGAATTGGCTTCATCATATCTTTCTGACTCAAGCGCCTTTCATTCATTCACATCTGCTGATGATACAGCTTTTGATTCTCAGAAAAGTTTTGGGTCAATAGAGGATATGATATTGTCCATATCTGGGTCTCGTAACTCATCAATGCTGGAACCCATGTCATATACAAAGTCCATGCATACCAGAATTTCCTTTGGAGAAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAACCGATTTGAAGCCTTAAGAAGGGTCTGCTGTCCTTCAGAGCTTGATTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGAGAGCTCAAGGTGGCAAGAGTAATGTATTCTTTGCGAAAACCTTGGATGATCGATTCATCATCAAGCAAGTTACCAAAACAGAGCTTGAGTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGAACAGGAAGTCCAACATGCCTGGCAAAGATCCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAAGAAACAAAGATGGATGTTTTGGTAATGGAGAATCTTCTATTTAGGAGGACCGTGACACGACTATATGATCTTAAGGGGTCTTCCAGGTCGCGGTATAATCCAGATAGTAGTGGGAAAAACAAAGTTCTGCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGATTGCTAGAAAGAGGTGTCTGGAATGATACTGGTTTTCTTGCATCAGTAGATGTAATGGACTATTCTTTACTTGTTGGGGTGGATGAAGAGAAGCATGAGTTAGTAATTGGAATCATTGATTTCATGAGACAGTATACTTGGGACAAGCATCTTGAAACATGGGTGAAAGCTTCTGGCATCCTTGGAGGACCAAAGAACACACCTCCAACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGAACACTTACTTTCTTATGCTTCCAGATCAGTGGTCTCCTCCATCTATCATTACTAGTCATTCCCAATCTGATTTAGCTGAAGACAACAACAACAATAACACACAATCTAGGACTTCAGCTGAATGA 5448 0.4218 MDALDKAFSDLVGTIKSWIPWRSEPTNVSRDFWMPDNSCRVCYECDSHFTIFNRRHHCRLCGRIFCANCTTNSIPASFSSERNSWDELEKIRVCNYCYKQWELGIVAHDNSIQPSDLDRCDSMSISSVASSKSSGIANSSNMTLFSLPYSVGSYQQMQQDSSLDLYQSPMSGIGSEGESLSVSGGTDNLVADLGNPLSKQYGFSINRSDDDEDEHGIYRSDSDLRHYAPENSYFEQAKFDGVNNTDGSQKARPDGENISAKFSSKHSFDAQGLEGAPIVGKNEDEPDTYDENEAPSSLYVSEDVDLEPVDFENNGLLWLPPEPEDEEDEREATLFDDDEDDNDVNTVGEWGYLRNSSSFGSGEHHLRERSSEEQKKVMKNVVDGHFRALVTQLLQVENLPVEDNDKNSWLEIITSLSWEAATLLKPDMSKGGGMDPAGYVKIKCIASGSRIESMVVKGVVCKKNVAHRRMTSKVDKARILILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHHPNILLVEKSVSRYAQEYLLAKEISLVLNVKRPLLERIARCTGTQIVPSIDHLSSQKLGCCETFHVEKFIEDLIGAGQGAKKTVKTLMFFEGCPKPLGCTILLRGADADDLKKVKHVVQYGVFAAYHLAMETSFLADEGVSLPELPLNSLALPNKSSSIQRSISTVPGFSVPGNEKPQELEPDTEPRRTKSVTIADLASLASTAGPCAPNDFSQSMPPGSSVNHSYYKKPLPFNSKVKDETDSKQLVVEEISAVDNTLAVMDDPTVSGKLDQHISADTPQNDNSKVDQLSGSEMLSPEDVQKHSVKPEIINEEPVPLKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVHCYTHRQGTLTISVKKIPEILLPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLVFDYEDLNWIQKESNEVVSRAEFLFSDVLTGLSQIGDRRSIAVPVNSGLKTPELSHQVAELEGILQKEKLEFEESLHKILNQERRKGQPGIDILEINRLRRQLLFQSYMWDHRLIYAANSGNETDLNSSIPDDKERHIDEYQTSMASMEVKGFSGVNSIHDDPMLNKSHSVGAGRGGGVDGGISQSDASNQEIDMAENKNNMKEDPPNLSIRKSISGQSELFEPELGAHIALSDGPFPVIPSLSDTLDAKWTGEDHSGLGIQKENTSVNSDTFMVDALANTVHKEAYNLGDHAEDQNGPKGIHSASKGHDNMEDSLSWLGMPFLNFYRQFNKNFFASTQNIDTIVDYNPVYVSSFRKLELQGGARLLLPIGVNDTVIPVYDDEPSSIIAYALTSPEYHFQLTDDGERPKDGIELASSYLSDSSAFHSFTSADDTAFDSQKSFGSIEDMILSISGSRNSSMLEPMSYTKSMHTRISFGEDGPLGKVKYSVTCYYANRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKETKMDVLVMENLLFRRTVTRLYDLKGSSRSRYNPDSSGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERGVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMNTYFLMLPDQWSPPSIITSHSQSDLAEDNNNNNTQSRTSAE* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1035 1815 SUPERFAMILY SAICAR synthase-like 1510 1778 - -
Lan9g1035 1815 CDD Fab1_TCP 387 658 - -
Lan9g1035 1815 SUPERFAMILY FYVE/PHD zinc finger 31 101 IPR011011 -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 204 224 - -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 683 708 - -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 1791 1815 - -
Lan9g1035 1815 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Lan9g1035 1815 Pfam TCP-1/cpn60 chaperonin family 406 649 IPR002423 GO:0005524
Lan9g1035 1815 SMART PIPK_2 1488 1779 IPR002498 GO:0016307|GO:0046488
Lan9g1035 1815 MobiDBLite consensus disorder prediction 237 252 - -
Lan9g1035 1815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1553 1720 IPR002498 GO:0016307|GO:0046488
Lan9g1035 1815 Gene3D GroEL 451 624 IPR027409 -
Lan9g1035 1815 CDD PIPKc_PIKfyve 1515 1778 IPR044769 GO:0000285
Lan9g1035 1815 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 105 IPR013083 -
Lan9g1035 1815 Gene3D - 1637 1779 - -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 205 224 - -
Lan9g1035 1815 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Lan9g1035 1815 MobiDBLite consensus disorder prediction 790 822 - -
Lan9g1035 1815 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1801 - -
Lan9g1035 1815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1454 1778 IPR002498 GO:0016307|GO:0046488
Lan9g1035 1815 CDD FYVE_PIKfyve_Fab1 32 99 - -
Lan9g1035 1815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1474 1635 IPR027484 -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 790 816 - -
Lan9g1035 1815 SMART fyve_4 28 103 IPR000306 GO:0046872
Lan9g1035 1815 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1801 - -
Lan9g1035 1815 MobiDBLite consensus disorder prediction 237 293 - -
Lan9g1035 1815 SUPERFAMILY GroEL apical domain-like 452 624 IPR027409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1035 Lan-Chr9 17588979 17599726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1035 2 1810 EF-hand Containing Proteins AT3G14270 57.827 0.0 2002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1035 K00921 - gmx:100819364 2833.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1035 9 17588979 17599726 Lan2g0865 2 18975160 18986525 LSH