Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1032 ATGGGTTCTTACTCTTCTGATTCATCCTTCCCTGTCACCGCTAGTAACATCAATCCCAAGGTTGTGAAGTGTGAGTATGCTGTTCGAGGAGAGATTGTCACACTTGCCCAGAAATTGCAAGAAAGTTTGAATGCAAATCCAGGCTCTCATCCATTTGACGAGATACTCTACTGCAACATTGGAAATCCGCAATCTCTTGGCCAGAAGCCAATAACTTTTTTCCGTGAGGTTCTTGCATTATCTGACCATCCTGATATTTTGGATAGAGCTGAAACACAGGGTTTATTCAGTGCTGACTCAATAAAGCGAGCTCAGACTATTTTGGGTCAGATTCCTGGGAGAGCAACTGGCGCTTACAGTCATAGTCAGGGTGTTAAGGGCCTGCGTGATGCAATAGCTGCTGGAATTGAAGCCCGTGATGGCTTTCCTGCTGACCCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCGGTACATACGATGATGCAATTACTCATAAGATCGGAAAATGATGGTATTTTGTGTCCCATCCCCCAGTACCCTCTGTACTCTGCCTCAATTGCCCTCCATGGTGGCACATTGGTACCTTACTATCTTGATGAAGCAAGTGGTTGGGGGTTGGAACTATCTGAAGTCAAGAAGCAATTGGAGGATGCCAAGTCCAAGGGCATCAGTGTTAGGGCTTTGGTTGTTATAAATCCCGGCAACCCAACTGGACAGGTTCTTTCTGAAGAAAACCAGCGTGAAATAGTGAAATTTTGCAAACAAGAAGGCCTTGTTCTTTTGGCTGATGAGGTATATCAAGAAAATGTGTATGTTCCTGAGAAGAAATTTCACTCGTTCAAGAAGGTATCTCGTTCTCTGGAATATGGTGAGAGTGATATCACACTAGTATCTTTTCAATCTATATCCAAGGGCTATCATGGGGAATGTGGGAAGCGAGGAGGTTATATGGAAGTGACTGGTTTTTCTGCTGAAGTGAGGGAGCAGGTATACAAGTTGGCATCGGTGAATCTTTGTTCGAATATCTCTGGTCAAATTCTATCAAGCTTGGTCATGAGTCCACCACAGGTTGGAGATGAGTCCTATGAGTTATACAAGGCTGAGAAGGATGCAATTTTATCTTCCCTTACTAGGCGTGCAAAGGCACTTGAAGATGCATTGAACAAATTAGAGGGTGTGTCATGCAACAAAGCAGAAGGGGCAATGTATTTGTTTCCCCGCATTCGCCTGCCGGAAAAGGCAATCAAAGCAGCTGAAGCTGTAAACAAAGCTCCTGATGCCTTCTACTGTGCACGTCTCCTGAATGCTACCGGAGTAGTTGTTGTCCCTGGTTCTGGTTTTGGACAGGTTCCTGGTACCTGGCATTTTAGGTGCACCATCCTTCCCCAGGAGGAGAAAATTCCAGCTATCGTTTCCCGCTTGACGGCATTCCATGAAAAATTCATTGATGAGTTTCGTGACTGA 1470 0.4503 MGSYSSDSSFPVTASNINPKVVKCEYAVRGEIVTLAQKLQESLNANPGSHPFDEILYCNIGNPQSLGQKPITFFREVLALSDHPDILDRAETQGLFSADSIKRAQTILGQIPGRATGAYSHSQGVKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHTMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEASGWGLELSEVKKQLEDAKSKGISVRALVVINPGNPTGQVLSEENQREIVKFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSLEYGESDITLVSFQSISKGYHGECGKRGGYMEVTGFSAEVREQVYKLASVNLCSNISGQILSSLVMSPPQVGDESYELYKAEKDAILSSLTRRAKALEDALNKLEGVSCNKAEGAMYLFPRIRLPEKAIKAAEAVNKAPDAFYCARLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTAFHEKFIDEFRD* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1032 489 Gene3D - 66 116 - -
Lan9g1032 489 Coils Coil 375 395 - -
Lan9g1032 489 Gene3D Aspartate Aminotransferase, domain 1 16 487 IPR015422 GO:0003824
Lan9g1032 489 PANTHER ALANINE AMINOTRANSFERASE 5 488 IPR045088 GO:0008483
Lan9g1032 489 CDD AAT_like 119 476 - -
Lan9g1032 489 Pfam Aminotransferase class I and II 104 468 IPR004839 GO:0009058|GO:0030170
Lan9g1032 489 SUPERFAMILY PLP-dependent transferases 15 482 IPR015424 -
Lan9g1032 489 Gene3D - 117 363 IPR015421 GO:0003824
Lan9g1032 489 PANTHER ALANINE AMINOTRANSFERASE 2 5 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1032 Lan-Chr9 17563076 17569611 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1032 K00814 - gmx:100776235 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0586 11 4668502 4674463 Lan9g1032 9 17563076 17569611 LSH