Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1015 ATGGCAACAGTGACTGCTTCAAGCAACTCAGTCTCCAGAAATTCTCAGCTCCATTATGGACCAACTATATCATATGATCCTAAAACTGCACCAATGAGACTTCAATATCAAAATCAAATCAATACTCATAATGGACTTAGAATTTTGAACATAGTGGATGTACTGCGAAATAGAACACCAATCAAAGTGAATTCAGCAGAAGCTAGGAAGAAAAAACTTCAAAGCAAGAATATTAGGCATACAGGCACAATCATATGTGGCATGAATTTGATATTTGTGGGAACTGAGGTTGGTCCATGGAGCAAAACTGGAGGGTTAGGAGATGTTCTTGGAGGTCTGCCACCAGCTTTGGCAGCTAATGGACATCGCGTTATGACCATTGCTCCGCGTTACGACCAGTACAAAGATGCATGGGATACAAGTGTTGTAGCTGAGGTAAAAGTAGGAAATAGAACTGAAAAAGTTGGCTTCTTTCATTGCTATAAAAGAGGAGTTGATCGCGTCTTTGTTGATCATCCTGTATTTCTTGAAAAGGTCTGGGGCAAAAGCGGAACCAAACTTTATGGACCTGCAGCTGGAGATGATTACGAAGATAATCAACTACGATTCAGCCTCTTCTGTCAGGCAGCTCTGCTAGCACCAAGGGTTCTGAATCTTAAGGGCAGTAAATATTTCTCTGGACCATATGGCGAAGATGTTATTTTCATTGCAAATGATTGGCACACTGCTCTTCTCCCCTGCTACATGAAAACTATATACCAACCATTCGGAATTTTCAAGAACGCTCGAGTTGTATTTTGTATCCACAACATTGCTTACCAAGGCAGATTTCCGTTCGTTGACTTTTCACTTCTCAATCTCCCTGACCAATTTAAAAGCTCCTTTGACTTCCTTGATGGGCATGTTAAACCAGTGATTGGAAGAAAAATCAATTGGATGAAAGCTGGAATTATAGAATCACACCAGGTGTTGACTGTAAGCCCATATTATGCTCAGGAACTAGTGTCGGGACCGGATAAAGGGGTGGAGTTGGACAACATCATTCGCAAAAATGGTATTATTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCTACCACTGATAAATACATAACTGTCAAATACACTGCTGCAACTGTGTTGGAAGGAAAGGCTCTTTTGAAAGAAGCCCTACAAGCAGAAGTTGGATTGCCAGTAGACAGAAATATTCCTATCATATGTTTCATTGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGAAGCCATTCCCCAATTTATTGAGGAGAATGTTCAGATAGTAGCCCTTGGAACAGGTAAAAAACAAATGGAAAAGCAACTTCAGCAGCTTGAAGTATCATACCCTGACAAGGCCAGAGGAGTGGCGAAATTTAATGTTCCCCTAGCTCATATGATAATCGCCGGAGCTGATTTTATATTGATTCCTAGCAGATTTGAGCCTTGTGGTCTTATTCAATTACAAGCTATGCGCTATGGAACTGTACCTCTTGTTGCCTCAACTGGTGGACTAGTTGACACAGTCAAAGAAGGTTTCACAGGATTTCAGATGGGTGCTTTCAATGTTGAATGTGAAGCTGTGGATCCTGCTGATGTAGATGCTCTGGCTAAGACTGTAAAAAGGGCTCTTGCAGTTCATGGAACTCCAGCTTTTAGAGAAATTATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAAGTACTGCTAGGCTTGGGAGTTCCTGGCAGTGAACCAGGAATTGATGGCGAAGAAATTGCACCACAAGCAAAGGAAAACGTGGCAACTCCATAA 1845 0.4157 MATVTASSNSVSRNSQLHYGPTISYDPKTAPMRLQYQNQINTHNGLRILNIVDVLRNRTPIKVNSAEARKKKLQSKNIRHTGTIICGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTSVVAEVKVGNRTEKVGFFHCYKRGVDRVFVDHPVFLEKVWGKSGTKLYGPAAGDDYEDNQLRFSLFCQAALLAPRVLNLKGSKYFSGPYGEDVIFIANDWHTALLPCYMKTIYQPFGIFKNARVVFCIHNIAYQGRFPFVDFSLLNLPDQFKSSFDFLDGHVKPVIGRKINWMKAGIIESHQVLTVSPYYAQELVSGPDKGVELDNIIRKNGIIGIVNGMDVQEWNPTTDKYITVKYTAATVLEGKALLKEALQAEVGLPVDRNIPIICFIGRLEEQKGSDILVEAIPQFIEENVQIVALGTGKKQMEKQLQQLEVSYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTVPLVASTGGLVDTVKEGFTGFQMGAFNVECEAVDPADVDALAKTVKRALAVHGTPAFREIIKNCMAQDLSWKGPAKKWEEVLLGLGVPGSEPGIDGEEIAPQAKENVATP* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1015 614 MobiDBLite consensus disorder prediction 1 24 - -
Lan9g1015 614 Pfam Starch synthase catalytic domain 90 350 IPR013534 -
Lan9g1015 614 Gene3D Glycogen Phosphorylase B; 90 580 - -
Lan9g1015 614 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 86 584 - -
Lan9g1015 614 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 88 586 IPR011835 GO:0004373
Lan9g1015 614 Hamap Glycogen synthase [glgA]. 88 589 IPR011835 GO:0004373
Lan9g1015 614 MobiDBLite consensus disorder prediction 1 22 - -
Lan9g1015 614 Gene3D Glycogen Phosphorylase B; 361 571 - -
Lan9g1015 614 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 614 - -
Lan9g1015 614 Pfam Glycosyl transferases group 1 405 527 IPR001296 GO:0016757
Lan9g1015 614 CDD GT5_Glycogen_synthase_DULL1-like 89 585 - -
Lan9g1015 614 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1015 Lan-Chr9 17140364 17144466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1015 1 614 Glycosyltransferase AT1G32900 69.044 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1015 K13679 - gmx:100817424 1012.68