Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0992 ATGGACAGCAACCGGAACATGAGTGAAATAACAACCATGAAATCTGAGTTTGAGGATTTGCTACCAGTGATGGCAGAGAAGTTAGATGTGGAAGCCTTTATGTCTGAACTGTGTGGTGGTTTCAAGCTTCTAGCCGACCAAGAAAATGGATTGATCACAAGTGAGAGTTTGAGGCGAAACTCGGCACTGCTTGGTATGGATGGTATGAGCAAGGAAGATGCAGAGGCTATGGTTAGAGAAGGTGATATTGATGGAGATGGAAAGTTAAATGAGACTGAGTTTTGCATCCTCATGGTGAGGCTTAGCCCTGGGATGATGGAACATGCTGAAGAATGGTTGGAGAAGACTATTGAGGAAGAGCTCATGAAATCATGA 375 0.44 MDSNRNMSEITTMKSEFEDLLPVMAEKLDVEAFMSELCGGFKLLADQENGLITSESLRRNSALLGMDGMSKEDAEAMVREGDIDGDGKLNETEFCILMVRLSPGMMEHAEEWLEKTIEEELMKS* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0992 124 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
Lan9g0992 124 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Lan9g0992 124 Gene3D - 14 124 - -
Lan9g0992 124 PANTHER CALCIUM-BINDING PROTEIN KIC 7 123 IPR044205 GO:0005509
Lan9g0992 124 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Lan9g0992 124 SUPERFAMILY EF-hand 22 122 IPR011992 -
Lan9g0992 124 PANTHER CALCIUM-BINDING PROTEIN KIC 7 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0992 Lan-Chr9 16792466 16793132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0992 8 121 EF-hand Containing Proteins AT2G46600 69.298 2.03e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0992 K24345 - gmx:100801586 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0992 9 16792466 16793132 Lan2g0730 2 15422594 15423301 LSH