Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0771 ATGGCAGATGCAAAACAAAGGTATGCTGTTGTTACAGGTTCAAACAAAGGGATAGGATTTGAGACTGTAAAAGGGTTAGCATCAAACGGAATCAAGGTGGTTCTCACAGCAAGAGATGAGAAGAAGGGTTATGAAGCTGTTCAGAAATTGAGAGAGTGTGGTCTCTCTGACCTTGTGGTTTTTCATAAGCTTGATGTGACTGATCCTGCTACTATTGCATCTTTAGTTGAGTTTGTTAAGGTTCAATTTGGGAGACTTGATATCTTGGTGAACAATGCAGGAATCAATGGGTTCAATATGGATGACTTGGTGGAATCAACAATTAACTGGAGGGAGCTCCCTGAAACTTATGAGATGGCTGAAAAATGCTTAAAAACAAACTACTATGGTGCTAAGGAAACAACTGAAGCATTTCTTCCCCTTCTACATTTATCCAATTCACCTTATATTGTTAATGTTTCCTCCGAAGCTGGGAAGTTAAAGTACATATCAAATGAATGGGCTAAGAGGGTATTGGAAGATACTGAAAATATTACAGAAGAGAGAATAGACAAGGTAGTGAAGGAGTTTATGAAAGACTTCAAAGAAGATTCAGTGAAACAAAAAGGGTGGCCAACCTTTTTGTCTGCCTATACTGTCTCAAAAGCAGCCTTGAGTAGTTACACAAGACTTCTAGCTAAGAAGCATCAAAACATGTGCATTAATTGTGTCTGCCCTGGTTTTGTGAAGACAGACATGACCAAAAACTCTGGCATATTATCTGTTGAAGATGGTGCTGCTAGTGTTGTGAGATTAGCATTGCTTCCTAATGGTTCTTCTTCTGGTAACTTCTTTTCTCGACAAGAAGTATCAGACTTTTGA 861 0.3879 MADAKQRYAVVTGSNKGIGFETVKGLASNGIKVVLTARDEKKGYEAVQKLRECGLSDLVVFHKLDVTDPATIASLVEFVKVQFGRLDILVNNAGINGFNMDDLVESTINWRELPETYEMAEKCLKTNYYGAKETTEAFLPLLHLSNSPYIVNVSSEAGKLKYISNEWAKRVLEDTENITEERIDKVVKEFMKDFKEDSVKQKGWPTFLSAYTVSKAALSSYTRLLAKKHQNMCINCVCPGFVKTDMTKNSGILSVEDGAASVVRLALLPNGSSSGNFFSRQEVSDF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0771 286 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Lan9g0771 286 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Lan9g0771 286 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Lan9g0771 286 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Lan9g0771 286 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Lan9g0771 286 Pfam Enoyl-(Acyl carrier protein) reductase 201 249 - -
Lan9g0771 286 Gene3D - 2 286 - -
Lan9g0771 286 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 198 226 IPR020904 GO:0016491
Lan9g0771 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Lan9g0771 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Lan9g0771 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 230 IPR002347 -
Lan9g0771 286 CDD carb_red_PTCR-like_SDR_c 7 286 IPR045313 GO:0016616
Lan9g0771 286 Pfam short chain dehydrogenase 8 163 IPR002347 -
Lan9g0771 286 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 4 286 - -
Lan9g0771 286 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 286 - -
Lan9g0771 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 273 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0771 Lan-Chr9 12583326 12586706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0771 10 251 Acyl Lipid Metabolism Gene Families AT1G24360 22.041 2.00e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0771 K15095 - gmx:111064653 454.521